Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2126 |
Symbol | |
ID | 6282961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 2399906 |
End bp | 2400982 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642621685 |
Product | secretion protein HlyD family protein |
Protein accession | YP_001895751 |
Protein GI | 187924109 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCCG CTACCCGATT TTCTCCCAGA ACGATCCGTC TGGCCGCCTA TGCGGTCATA CTCGGCGTCG CTGTGCTGGC CTGCATCTGG CTGTTTGCCG GCTCGACCAG CGAAACCACG AACGATGCCT ATGTGACGGC CGATTTCACG CTGGTCGCGC CGCGTGTCGC GGGTCAGGTG TCCGAGGTGC TCGTTGAAGA CAACCAGCAG GTCAAGGCGG GGCAATTACT GGTACGCATC GATGACCGCG ACTTTCGTGC CGCGTTGATG AGTGCCGGGG CCGACGTGGC GGCAGCCAGG GCATCGGTTG CAAACTACGA GGCCGAGATC GCACGGCAGC CCGCGCTCGT CGATCAGGCG CGTGCCACGC TGCGCGCCGA CGATGCGACG CTCGAGTTTG CGCGTGCGAA TGCCGCGCGC TACCGCAATC TTTCGGAGAC CGGTGCGGGA ACCACCCAGG AGCAGCAGCA CGCGGCGAGC GCGCTGGCCG AGGAACTCGC GCAGCAGGCG CGCAACCGCG CCGCACTGGT GGCGACCGTG CAGAACCTCG ACGTGCTGAA GACACAGCGC GACAAGGCGG CGGGTGCCTT GGCCCGCGCC GAAGCCATGC TCGAGCAGGC GAAACTCAAC CTGTCGTATA CGGAGATCCA CGCGCCCATC GACGGCAAGG TCGGACGGCG TTCGGCACGT GTGGGCGCAT TCGTGACGAC CGGCGCGCCG CTGCTCGCGA TCGTCCCGCT GTCGGAGGCC TATATCGTCG CCAATTTCCA GGAGAACCAG CTTGCAAGGA TGCGCCCCGG CGACACCGTG CGTATCAAGG TCGACAGTTT TCCGGGCGTG GTGATCCGCG GGCATGTCGA TAGTCTTGCG CCTGCTACAG GCGTGAGCTT CGCGCCTATC GCACCCGATA ACGCAACGGG CAACTTCACC AAGATCGTGC AGCGCGTGCC GGTCAGAATC ACCATCGATC ATGGACAACA GGCGGCGGCC GCATTGAGTG TGGGCCTTTC CGTCGAAACG GAGGTCGCCG TCGGCAGGCG CGCCGATATG CGGGTCGCGG GAGCGGATTC GAAATGA
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Protein sequence | MSSATRFSPR TIRLAAYAVI LGVAVLACIW LFAGSTSETT NDAYVTADFT LVAPRVAGQV SEVLVEDNQQ VKAGQLLVRI DDRDFRAALM SAGADVAAAR ASVANYEAEI ARQPALVDQA RATLRADDAT LEFARANAAR YRNLSETGAG TTQEQQHAAS ALAEELAQQA RNRAALVATV QNLDVLKTQR DKAAGALARA EAMLEQAKLN LSYTEIHAPI DGKVGRRSAR VGAFVTTGAP LLAIVPLSEA YIVANFQENQ LARMRPGDTV RIKVDSFPGV VIRGHVDSLA PATGVSFAPI APDNATGNFT KIVQRVPVRI TIDHGQQAAA ALSVGLSVET EVAVGRRADM RVAGADSK
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