Gene Bphyt_2121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2121 
Symbol 
ID6282956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2394143 
End bp2395168 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content61% 
IMG OID642621680 
Producttranscriptional regulator, AraC family 
Protein accessionYP_001895746 
Protein GI187924104 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCG CCATTGTTGT ACTCGATGAT GTGCAGGCGC TGGATGTCGC TGGCCCCCTG 
GACGTATTCG CGGAAGCAAA CACATTTCTG CCCGAGCATC AGAAATACGA GGTCTTTCTG
GTAGGAAACG AAGCCGGCAC CGTGACCTGC TCCAACGGGA TGCAACTCAC GGTTCCCCAT
GGCTATACGG ACTTCGACAC GCCATTCGAC CTGCTGCTGG TGGCAGGCGG ACCGCGCTTG
CCCGATGTCC AGCCGCAGCC CGAATTTCTG AAGTGGCTGC AAGACCAGGC GGGTGGCGCA
AGCCGGTTCG GTTCCGTTTG CAACGGCGCA TTCGTGCTCG CGCACGCCGG CCTGCTCGAC
GGCAAGGAAG TGACGACGCA CTGGGCGGAT GCAAGCCGCC TCGCCGACGA GTTTCCGCAG
GCGTCCGTGC AGCCCGACCG GATCTTCATC CGCGATGGAC GCCTCTTTAC CTCCGCTGGC
GTGACGGCGG GCATCGACCT GTGTCTTTCG CTCGTCGCCG AAGACTGGGG GCACGAACTG
GCGGTTCGGG CTGCGAAACG TCTGGTGGTC TACATCCAGC GCGAAGGCGG ACAATCTCAA
TACAGTCCTT ACGTCGGAGT GCGCAAGGAC CAGGATCCGA TCGTCGGCAA GGTGCTCCGC
TACGTGACCG AGCACATAAC CGAAGCGTTG TCGATCGAAC AGCTTGCCAG CGCCGTGTCG
GTCAGCCGGC GTACCTTCTC ACGGTTATTC GCGAAGTATG CGAAGGTGAC GCCTTCGGCA
TTTGTCGAAC AGGTTCGCGT CGACACCGCG AGGAAATTGC TCGAGGAAAC CGATGCGCCT
CTGAAGACCG TGGCGTTCAA TTGCGGTTTT CACAGCGCCA CGCATATGCG AGCCACTTTC
TTCCGGCGGC TCAACGTCAC GCCCAGACAG TATCGCCAGC GATTCCGTGG CACGGCGGGT
AAGCAGTGGA CATCGGGCGA TGTGGAAGAA CAAGTCGAAA CAGCGGAACT GGAATTGGTC
GACTAG
 
Protein sequence
MKVAIVVLDD VQALDVAGPL DVFAEANTFL PEHQKYEVFL VGNEAGTVTC SNGMQLTVPH 
GYTDFDTPFD LLLVAGGPRL PDVQPQPEFL KWLQDQAGGA SRFGSVCNGA FVLAHAGLLD
GKEVTTHWAD ASRLADEFPQ ASVQPDRIFI RDGRLFTSAG VTAGIDLCLS LVAEDWGHEL
AVRAAKRLVV YIQREGGQSQ YSPYVGVRKD QDPIVGKVLR YVTEHITEAL SIEQLASAVS
VSRRTFSRLF AKYAKVTPSA FVEQVRVDTA RKLLEETDAP LKTVAFNCGF HSATHMRATF
FRRLNVTPRQ YRQRFRGTAG KQWTSGDVEE QVETAELELV D