Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2121 |
Symbol | |
ID | 6282956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 2394143 |
End bp | 2395168 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642621680 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_001895746 |
Protein GI | 187924104 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTCG CCATTGTTGT ACTCGATGAT GTGCAGGCGC TGGATGTCGC TGGCCCCCTG GACGTATTCG CGGAAGCAAA CACATTTCTG CCCGAGCATC AGAAATACGA GGTCTTTCTG GTAGGAAACG AAGCCGGCAC CGTGACCTGC TCCAACGGGA TGCAACTCAC GGTTCCCCAT GGCTATACGG ACTTCGACAC GCCATTCGAC CTGCTGCTGG TGGCAGGCGG ACCGCGCTTG CCCGATGTCC AGCCGCAGCC CGAATTTCTG AAGTGGCTGC AAGACCAGGC GGGTGGCGCA AGCCGGTTCG GTTCCGTTTG CAACGGCGCA TTCGTGCTCG CGCACGCCGG CCTGCTCGAC GGCAAGGAAG TGACGACGCA CTGGGCGGAT GCAAGCCGCC TCGCCGACGA GTTTCCGCAG GCGTCCGTGC AGCCCGACCG GATCTTCATC CGCGATGGAC GCCTCTTTAC CTCCGCTGGC GTGACGGCGG GCATCGACCT GTGTCTTTCG CTCGTCGCCG AAGACTGGGG GCACGAACTG GCGGTTCGGG CTGCGAAACG TCTGGTGGTC TACATCCAGC GCGAAGGCGG ACAATCTCAA TACAGTCCTT ACGTCGGAGT GCGCAAGGAC CAGGATCCGA TCGTCGGCAA GGTGCTCCGC TACGTGACCG AGCACATAAC CGAAGCGTTG TCGATCGAAC AGCTTGCCAG CGCCGTGTCG GTCAGCCGGC GTACCTTCTC ACGGTTATTC GCGAAGTATG CGAAGGTGAC GCCTTCGGCA TTTGTCGAAC AGGTTCGCGT CGACACCGCG AGGAAATTGC TCGAGGAAAC CGATGCGCCT CTGAAGACCG TGGCGTTCAA TTGCGGTTTT CACAGCGCCA CGCATATGCG AGCCACTTTC TTCCGGCGGC TCAACGTCAC GCCCAGACAG TATCGCCAGC GATTCCGTGG CACGGCGGGT AAGCAGTGGA CATCGGGCGA TGTGGAAGAA CAAGTCGAAA CAGCGGAACT GGAATTGGTC GACTAG
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Protein sequence | MKVAIVVLDD VQALDVAGPL DVFAEANTFL PEHQKYEVFL VGNEAGTVTC SNGMQLTVPH GYTDFDTPFD LLLVAGGPRL PDVQPQPEFL KWLQDQAGGA SRFGSVCNGA FVLAHAGLLD GKEVTTHWAD ASRLADEFPQ ASVQPDRIFI RDGRLFTSAG VTAGIDLCLS LVAEDWGHEL AVRAAKRLVV YIQREGGQSQ YSPYVGVRKD QDPIVGKVLR YVTEHITEAL SIEQLASAVS VSRRTFSRLF AKYAKVTPSA FVEQVRVDTA RKLLEETDAP LKTVAFNCGF HSATHMRATF FRRLNVTPRQ YRQRFRGTAG KQWTSGDVEE QVETAELELV D
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