| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2096 |
|---|
| Symbol | |
|---|
| ID | 6283329 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 2361524 |
|---|
| End bp | 2362591 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642621656 |
|---|
| Product | ABC sulfate ester transporter, periplasmic ligand binding protein |
|---|
| Protein accession | YP_001895722 |
|---|
| Protein GI | 187924080 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.522896 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTATT TCCATCTGCT GAAGTCTTTC GTCGCCGTGG CGACCCTCTC GCTTGCCGCG
GCTTACGCCT ATGCCGACAA ACCCGCGGTG ATCCGTATCG GCGTCGCGCA ACAAGGCACG
GGAGATCCGC CCACCTTCGG CGGCTCGCCG GCGGCCACCG TGCAACTGCA GCAGTCGCTG
GAAAAGGAAT TCGCCGCCGA CGGCATCAAG GTCGAGTGGC TGTTCTTCAA GGGTGCCGGC
CCGGCAGTCA ACGAGGCAAT CGCCGACAAG TCGCTCGACT TTGCATTCCA GGGCGATCTG
CCTGCCGTGC TCGCTCGCGC CAACGGCCTG AAAACGCACC TGTTACTCGC CTCGGGCGTG
CGCACCGGCA TCAAGGTGGC GGTACCCACC GATTCGGATG TGCATTCCAT CAAGGACCTG
AAAGGCCGGC GCGTGTCGAT CTTTCGCGGC ACCAATCTGC AACTCGTCGC CGACAACGCG
CTCGCCGCCA ATCAGCTGAA CGAACGCGAT CTGCGCGTGA TCAATCTGGA TACCGCCAGC
TCACTCGCGG CGCTGGCCTC CAAGGGCATC GACGCGTCGG TCAACGATTA CCACGTGTAC
AAGCTGCGCG ATCAAGGCCT CGCGAAGGTG GTCTACGAAT CGCAGAACGA CGGTCCGCAA
TTCACGCGGC AGTCGCATCT GCTCGTGATC GACGACTTCG ATCGTGCGCA TCCGGATATC
GTGCAGCGCG TCGTCAACGT GTTCGTGCAA GGCGCGCAGT GGTCCTCCGA CGAAGCGAAC
CGCGATGCGC TCTTCAAACT GTGGGCCAAA AGCGGCGTGC CCTATTCGTC GTGGCAGGCC
GAGTTCGCCA ATCAGAAGCT GAAGGACCGT AACTCGCCGT TGATCGATCC GTTCATCGTG
GGGCGTTACA AAGCCGTCGC GGCGGATGCG CTGAACCTGA AGCTGATTCG CCAGCCGGTC
GAGGTCGATG GCTGGTTCGA AACGAAATAT CTCGACAACG CGCTGCGCAC GCAAAAGCTC
GACCACTACT GGACGCGTTA CGACGCCGCC GGCAAACCGC TCAGCTAA
|
|---|
| Protein sequence | MRYFHLLKSF VAVATLSLAA AYAYADKPAV IRIGVAQQGT GDPPTFGGSP AATVQLQQSL
EKEFAADGIK VEWLFFKGAG PAVNEAIADK SLDFAFQGDL PAVLARANGL KTHLLLASGV
RTGIKVAVPT DSDVHSIKDL KGRRVSIFRG TNLQLVADNA LAANQLNERD LRVINLDTAS
SLAALASKGI DASVNDYHVY KLRDQGLAKV VYESQNDGPQ FTRQSHLLVI DDFDRAHPDI
VQRVVNVFVQ GAQWSSDEAN RDALFKLWAK SGVPYSSWQA EFANQKLKDR NSPLIDPFIV
GRYKAVAADA LNLKLIRQPV EVDGWFETKY LDNALRTQKL DHYWTRYDAA GKPLS
|
|---|
| |