Gene Bphyt_2028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2028 
Symbol 
ID6282589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2292662 
End bp2293306 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content60% 
IMG OID642621593 
Productcytochrome c oxidase subunit III 
Protein accessionYP_001895659 
Protein GI187924017 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0000242871 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGACG CCGCCGATTT GAGCCAGACG TCCGCCCAGC CGGCCGAGCC TTTGCCGATC 
GGCAGCGCGG GCGAACGTTC GGGCGGCTGG TGGGGCTGCC TCACACTGAT CGCAACCGAA
GGCGCGTTGT TCGGATACCT GATCTTTTCA TATCTCTATC TGGCCTCGCA GAGTACGCAG
CGCTGGCCGC CTGAAGGCCT GCCGAAGCTC GGTCTCGGCA TTACGAACAC GGTGATTCTG
TTGTCGAGCA GCGTATTCGT CTGGTTGTGC GAGCGTTGTG TGAGGCGCAG GCGCTTGAAG
TGGGCCGTGG CCTCGATGGC GCTGGGCGTC CTGCTCGGTA TCGTATTCGT GGGCATTCAG
TTGCTCGAAT GGCACGATCA TCCGTACGGG CTGACGACGC ATCTGTATGG CTCGCTGTAT
TTCACCATCA CGGGATTCCA TATGGCGCAC GTCGTAGTCG GGATCGTCGT GCTGCTGTTT
TTGCTGTTGT GGACCGCGCT CGGCTATTTC GACGAGAAAC GTTGCGCGGC GCTGACCATC
GGCGGCCTGT ACTGGCATTT CGTCGACGTC GTGTGGTTGT TCATCTTCAG CACGCTGTAT
CTGACGCCTT ACCTGTTTCG GAATCTGTCA TGGCCGGCAA CATGA
 
Protein sequence
MSDAADLSQT SAQPAEPLPI GSAGERSGGW WGCLTLIATE GALFGYLIFS YLYLASQSTQ 
RWPPEGLPKL GLGITNTVIL LSSSVFVWLC ERCVRRRRLK WAVASMALGV LLGIVFVGIQ
LLEWHDHPYG LTTHLYGSLY FTITGFHMAH VVVGIVVLLF LLLWTALGYF DEKRCAALTI
GGLYWHFVDV VWLFIFSTLY LTPYLFRNLS WPAT