| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2026 |
|---|
| Symbol | |
|---|
| ID | 6282587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 2289551 |
|---|
| End bp | 2290591 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642621591 |
|---|
| Product | cytochrome c oxidase, subunit II |
|---|
| Protein accession | YP_001895657 |
|---|
| Protein GI | 187924015 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
|---|
| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0000905775 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGATCGA CGACAGCTGT TGCCCAGCGA GCTCTTGTCG GCATTCCTTG CGTCGTTTTG
ACTTTGTCGG CCACGAGGGC TCAGGCGAGT CCGAGCGCGC CGCTCAACTA TTTCCTTCAC
GCTGCGGGAC CGGCCGCCGC GCCGACCATG CATTTAGGCT GGGCGATGGC GGGTGTTTCG
GTCACCGTGA CAGTCGTCAT TGCAGGATTG CTGATTGCCG CGATCGTTCG CAAGCGTCCT
TCGGCAGCGA GCGACTCGCT CGATGCCGAA GCCGGCGGCA TGCGCTGGAT TTACATTGGC
ACGGGCGTGT CGTCGGTGGC CTTGCTCGCG ATGCTGGTCT ATGTCCTCAT CACGCTGGAG
TCGGTTGCAA CGCCTGCCAC GCACCCCCAG TTGAGCATCA CCGTGACCGC GTACGACTGG
TGGTGGAAAG TCGACTACGC CGACGATCCC AATCCGGCGC GCAACTTCAG CACCGCCAAC
GAGATCCACA TTCCCGTTGG CGAGCCTGTG AAGATAGCGT TGAAAAGCGC GGACGTCGTG
CACGCTTTCT GGGTGCCGCA ACTCGCGGGC AAAACGCAAG CGATCCCCGG CCAGACCAAC
GAGCAATGGT TCCAGGCCGA TCGGGCAGGC ATCTATCGCG GGCAATGCTC ACAGTTCTGC
GGCGCCCAGC ATGCGCACAT GGCTTTTGAA GTGGTCGCGC AGAGTCCTGC CGATTTCAAC
GCGTGGCGCG ATGCGCAGGG ACGAACGGCG GTAGCCGCAA CCGACAGCAG TGTCGCCACG
GGCCGCCGTC TGTTCGCCGA GCGCTGCGCC GGTTGCCACA CGATTCGTGG CACGGATGCG
AGCGGTCTGC AAGCGCCCGA TCTCACGCAT CTGAACTCGC GTCGCCTGAT CGCGGCGGGT
GCGCTGACCA ATACCCCGGA TCATTTACTC GACTGGGTTC AGCACGCCCA GTCGATCAAG
CCCGAGGCGC TGATGCCGAG CATCGCGCTG AGTGCCGCCG ACGCCGCCGC GCTGTCGGCC
TATCTGGCCA CGCTGCATTG A
|
|---|
| Protein sequence | MRSTTAVAQR ALVGIPCVVL TLSATRAQAS PSAPLNYFLH AAGPAAAPTM HLGWAMAGVS
VTVTVVIAGL LIAAIVRKRP SAASDSLDAE AGGMRWIYIG TGVSSVALLA MLVYVLITLE
SVATPATHPQ LSITVTAYDW WWKVDYADDP NPARNFSTAN EIHIPVGEPV KIALKSADVV
HAFWVPQLAG KTQAIPGQTN EQWFQADRAG IYRGQCSQFC GAQHAHMAFE VVAQSPADFN
AWRDAQGRTA VAATDSSVAT GRRLFAERCA GCHTIRGTDA SGLQAPDLTH LNSRRLIAAG
ALTNTPDHLL DWVQHAQSIK PEALMPSIAL SAADAAALSA YLATLH
|
|---|
| |