Gene Bphyt_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2019 
Symbol 
ID6284639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2281766 
End bp2282203 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content58% 
IMG OID642621584 
Producttranscriptional regulator, MarR family 
Protein accessionYP_001895650 
Protein GI187924008 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0237275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCACT ACACGCCGGA CAATTTCAGC CTGACGCTGA GCGTGGGTTT CTCGATCAAC 
AAAGCACGCA ACCTGTTGAT CAACGAAATG GACGCCGCGT TGAAGGATCT GGACATTACG
AGTCAGCAGA TGGGCATTCT GCTGTCCATG CGCCGCGGCG TCGCCACCAC GCCGTTCGAA
CTGTCGCGGC TGCTCGGCAT CGACACGGGC CTGATGACGC GCATGCTCGA CAAGCTGGAA
ATCAAGGGCT TGCTGGAACG CTCGCGCAGC ATCGAAGACC GCCGCGTCGT CAATCTGAAA
CTGACTGATG AAGGCGAGGC CATCGCCGAG CGGCTTCCGG AGATTGCGCC GGTGGTGCTG
AACCGTCGTC TGAAGAAGTT TACGAAAGCT GAATTCGAGG AGTTGCGCCG TCTGCTGAAC
AAGTTTCTCG CAGAGTAG
 
Protein sequence
MNHYTPDNFS LTLSVGFSIN KARNLLINEM DAALKDLDIT SQQMGILLSM RRGVATTPFE 
LSRLLGIDTG LMTRMLDKLE IKGLLERSRS IEDRRVVNLK LTDEGEAIAE RLPEIAPVVL
NRRLKKFTKA EFEELRRLLN KFLAE