Gene Bphyt_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2012 
Symbol 
ID6281066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2272307 
End bp2273503 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content62% 
IMG OID642621577 
Producttrans-2-enoyl-CoA reductase 
Protein accessionYP_001895643 
Protein GI187924001 
COG category[S] Function unknown 
COG ID[COG3007] Uncharacterized paraquat-inducible protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.224817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATCA AACCGCGCGT GCGTGGCTTC ATCTGCGTTT CCACCCATCC GACCGGCTGC 
GAAGCCAACG TCCGCGAACA GATCGACTAC GTCAAGGCGC GCGGCCCCAT CGCCAACGGC
CCGAAGAAGG TGCTCGTGAT CGGCGCATCC ACGGGCTACG GCCTCGCCGC CCGCATCAGC
GCGGCGTTCG GCTCGGACGC CGCCACGCTT GGCGTGTTCT TCGAGCGCGC CGGCAGCGAA
ACCAAGGCCG GCACGGCCGG CTGGTACAAC ACCGCCGCCT TCGAGAAATT CGCCACGGAA
AAAGGCCTGT ACGCGACCAG CATCAACGGC GACGCATTCT CCGACGAAGT CAAAGCGCGC
ACCATCGAAG TCATCAAGCG CGATCTGGGT CAGGTCGACC TGGTCGTCTA CAGCCTCGCC
GCGCCCAAGC GCACGCATCC GAAGAGCGGC GAAGTGTTCA GCTCGACCTT GAAGCCGGTC
GGCAAGGCGG TGAATCTGCG CGGCATCGAC ACGGACAAGG AAGTGATCAA GGAAACCGTG
CTCGAACCCG CCACCCAGAA AGAAATCGAC GACACCGTCG CGGTGATGGG CGGCGAAGAC
TGGCAGATGT GGATCGACGC GCTGCTCGAA GCCGGCGTGC TTGCCGATGG CGCGAAGACC
ACGGCGTTCA CCTATCTCGG CGAGAAGATC ACGCACGACA TTTACTGGAA CGGCTCGATC
GGCGCGGCCA AGAAGGACCT CGACCAGAAA GTGCTGGGCA TTCGCGAGAA GCTGGCGGCC
AAGGGCGGCG ACGCGCGCGT CTCCGTGCTG AAGGCGGTCG TCACGCAAGC GAGTTCCGCG
ATCCCGATGA TGCCGCTGTA TCTGTCGCTG CTCTTCAAGG TCATGAAGGA GAAAGGCACG
CACGAAGGCT GCATCGAACA GGTTTACGGC CTGTACAAGG ACAGCCTGTA CGGCGCGGCG
CCGCACATCG ACGAAGAAGG CCGTCTGCGC GCGGACTACA AGGAGCTCGA CCCCGAAGTG
CAGAACCGCG TACAGGAACT GTGGACGCAG GTGACCAACG ACAATATCTA CGAACTCACC
GATTTCAGCG GCTACAAGAC GGATTTCCTG CGTCTGTTCG GCTTCGAGAT CGCGGGTGTG
GATTACGAAG CGGACGTCAA TCCGGACGTG CAGATTCCGA AGCTCGTGCA GGTTTGA
 
Protein sequence
MIIKPRVRGF ICVSTHPTGC EANVREQIDY VKARGPIANG PKKVLVIGAS TGYGLAARIS 
AAFGSDAATL GVFFERAGSE TKAGTAGWYN TAAFEKFATE KGLYATSING DAFSDEVKAR
TIEVIKRDLG QVDLVVYSLA APKRTHPKSG EVFSSTLKPV GKAVNLRGID TDKEVIKETV
LEPATQKEID DTVAVMGGED WQMWIDALLE AGVLADGAKT TAFTYLGEKI THDIYWNGSI
GAAKKDLDQK VLGIREKLAA KGGDARVSVL KAVVTQASSA IPMMPLYLSL LFKVMKEKGT
HEGCIEQVYG LYKDSLYGAA PHIDEEGRLR ADYKELDPEV QNRVQELWTQ VTNDNIYELT
DFSGYKTDFL RLFGFEIAGV DYEADVNPDV QIPKLVQV