| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1989 |
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| Symbol | |
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| ID | 6282903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2245041 |
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| End bp | 2246198 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642621554 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001895620 |
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| Protein GI | 187923978 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.508045 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA ACCGCATTGC TGCCGCCGCA TTCACCGCAC TCGCCTCGCT GGCGGCGTCG
CCGGCCTTCG CTCAAAGCAG CGTCACGCTG TACGGCGTGC TCGACGAAGG CATCGACTAC
ACCAACAACG CGGGGCACGG CGCGGTCTGG GAAATGGCGA GCGGCTATGC GCAAGGCAGC
CGCTGGGGCA TGAAGGGTTC GGAGGATCTG GGCGGCGGTC TGAAGGCCGT GTTTCAACTC
GAAAACGGCT TCGACGTGAG TTCGGGACGG CTCGGCCAGG GTGGCCGCAT GTTCGGCCGC
CAGGCGTATG TGGGTCTGAG CGACGGCCGC TTCGGCACGG TCACGCTAGG CCGCCAGTAT
GATTCCGTGG TCGATTATCT CGCGCAGACC ACGGCCAACG GCAACTGGGC CGGCTACCTG
TTCGCGCATC CGTATGACAA CGACAACACC GACAACTCGT TCCGCCTCGG CAACAGCGTG
AAATACGCGA GCCCGGAAAT GGCGGGCTTC CAGTTCGGCG GCGCTTACGC TTTCAGTAAC
GACACCAACT TCGCGAACAA CCGCGCGTAT AGCTTCGGCG GGCAGTATGC GAATGGCGGC
CTGCTGATCG CCGCGGCGTA TATGCAGGCG GACAACCCTG GCGTGGGCTC GACAGGCGCG
ATTACCGCGA ACGACGCGAG TTTTATCGCG GGACGTATGC GCGTGTACGG CGGCGGCATC
AACTACACGT TCGGCTCGGC GACGGCTGGT TTTGCCTACA CCAACTCGAA CTACAAGAAT
CCGACGGGCA ACGGCTATAT CGGTATTCCG CTGGCCGCGC CGGGTGTGAC GTTGAATACG
CTGAAGTACC AGAACTTCGA GCTGAACGGC AAATACCAGT TCACGCCGGC GTTTTTCGTG
GGCGCCCAGT ACGTGTACAC GATGGAAAAC TACGATGCGT CGTCAGGCAG CGTGAAGCCG
AAGATTCACT CGGTGGGTTT GATGGCGGAT TACGACCTGT CGCGGCGCAT CGACGTGTAT
GTGCAGGGCG AGTATCAGAA GGTCGCGGGC GATTCGACTC ACTCGATTCT CGACGACGCG
TTTATTCCCG GTGTGCAGGC GCCGTCTTCG ACGGGCACGC AGGTCGCTGT GCGGGTTGCG
CTGCGGCATA AGTTTTAA
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| Protein sequence | MKKNRIAAAA FTALASLAAS PAFAQSSVTL YGVLDEGIDY TNNAGHGAVW EMASGYAQGS
RWGMKGSEDL GGGLKAVFQL ENGFDVSSGR LGQGGRMFGR QAYVGLSDGR FGTVTLGRQY
DSVVDYLAQT TANGNWAGYL FAHPYDNDNT DNSFRLGNSV KYASPEMAGF QFGGAYAFSN
DTNFANNRAY SFGGQYANGG LLIAAAYMQA DNPGVGSTGA ITANDASFIA GRMRVYGGGI
NYTFGSATAG FAYTNSNYKN PTGNGYIGIP LAAPGVTLNT LKYQNFELNG KYQFTPAFFV
GAQYVYTMEN YDASSGSVKP KIHSVGLMAD YDLSRRIDVY VQGEYQKVAG DSTHSILDDA
FIPGVQAPSS TGTQVAVRVA LRHKF
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