Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1983 |
Symbol | |
ID | 6283771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 2234815 |
End bp | 2237355 |
Gene Length | 2541 bp |
Protein Length | 846 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642621548 |
Product | nitrite reductase (NAD(P)H), large subunit |
Protein accession | YP_001895614 |
Protein GI | 187923972 |
COG category | [C] Energy production and conversion |
COG ID | [COG1251] NAD(P)H-nitrite reductase |
TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.385914 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.488023 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCA TCGTTATCGG TCACGGGATG GTCGGTCACA AACTGGTCGA GTGCCTCGCA CAAGACGCCG CGCACGGACT CGACATCACG GTGCTGTGCG AGGAATCGCG GCCGGCCTAC GACCGTGTGC ACCTGTCGGA GTTTTTCGCG GGCAAGACGG CGGACGATCT GTCGCTGGTC GAGCCCGGCT TCTTCGAACG TCAGAACGTG TTACTCAAAC TGAATGCGAA GGCCGTGGCG ATCGATCGCG ATGCGCGCAC CGTGACGGTA TCGACAGGCG AAACATTACC TTATGACAAG CTGGTTTTCG CCACCGGCTC CTATCCGTTC GTGCCGCCGG TGCAAGGCCG TGAACGCGCC GATTGCTTCG TGTACCGAAC TATCGACGAC CTCGAAGCGA TGCGCGAATG CGGCGCGCGC TCGAAGACGG GCACGGTGGT GGGCGGCGGA CTGCTCGGCC TCGAATGCGC GAAGGCGCTG CGCGACATGG GTCTGCAAAC GCACGTGGTC GAATTCGCGC CGCGTTTGAT GGCCGTGCAG GTGGACGACG GCGGCGGCCG TGTGTTGCGC GGCAAGATCG AAGAACTCGG CGTGACGGTG CATATGCAGA AGAACACCAC GGCGATCGTC GACGGCGAAG CGGGCACGCA CCGCATGCAA TTCGCCGACG GCAGCCATCT CGACACCGAC ATGATCGTAT TCTCTGCGGG CATTCGTCCG CGTGACGATC TCGCGCGTGC GAGCGGCCTG ACGCTCGGCC CGCGTGGCGG CATCGTGATC GACAACGCGT GCCGCACGAG CGATCCGCAC ATCTACGCGA TCGGCGAATG CGCGCTGTGG AATGGCCAAC TGTTCGGCCT CGTGGCGCCG GGTTACGACA TGGCTCGCGC GGTGGCGAAG CAATTGCTGG GCGACACGGC GGAATTCGCC GGCGCCGACA TGAGCACCAA GCTCAAGCTG ATGGGCGTGG ATGTGGCGAG CATCGGCGAC GCGCACGGCA ACACGCCGGG CAGCCGCGCG TACCAGTTCA GCGACGAGCG CAAGCAGGTC TACAAGAAGC TGGTGGTGTC CGAGTGCGGC AAATATCTGC TGGGCGGCGT GATGGTGGGC GACGCCGCCG AATACGGCAC GCTGCTGCAG ATGATGTTGA ACCGCATCGA ACTGCCTGCA TCGCCTGAAT TCCTGATCCT GCCGGCGGCC GACGGCAATG CGAAGCCCGC GCTCGGAGTC GATTCCTTGC CCGCTTCCGC GCAAATCTGT TCGTGCAACA ACGTCTCGAA GGGCGAGTTG TGCGCCGCCG TTTGCGCAGG CGCGACCGAC ATCGGCGCTT TGAAGTGCGC GACGACCGCC GGCACGTCAT GCGGCGGTTG CGTGCCGCTC GTCACGCAAG TGATGAAGGC CGAGATGAAG AAGCAGGGAC TCGCGGTCAA CAACCACGTC TGCGAACACT TCGCGTATTC GCGCCAGGAG CTGTATCACA TCGTGCGTGT GGAAGGCGTG CGCAGCTTCG GCGAACTGCT CGCGAAGCAC GGCCACGGCC TTGGCTGCGA TATCTGCAAG CCGGTGGTGG CGAGCGTGCT CGCGTCGTGC TGGAACGAGT TCGTGTTGAA GAAAGAGCAC GCCTCGCTGC AGGACACCAA CGACTATTAC CTCGCCAACA TTCAGCGCGA CGGCACCTAT TCGGTCGTGC CGCGCATGGC GGGCGGCGAA GTCACCCCCG ATGGTTTGAT CGCGGTCGGC CAGGTCGCCA AAAAATACGG CCTCTATACG AAGATCACCG GCGGCCAGCG TGTCGATCTG TTCGGCGCGC GCGTCGAGCA ATTGCCGCTC ATCTGGGAAG AGCTGATCGC CGCTGGTTTC GAATCGGGCC ACGCGTACGG CAAGTCGCTG CGCACGGTGA AATCGTGTGT CGGTTCGACG TGGTGCCGCT ACGGCGTCGG CGATTCGGTG GGCCTCGCGG TGGAGATCGA GAACCGCTAC AAGGGCCTGC GCACGCCGCA CAAGATCAAG TTCGGCGTGT CGGGCTGCAC TCGCGAATGC GCGGAAGCGC AAGGCAAGGA CGTCGGCATC ATCGCGACCG AGAAGGGCTG GAATCTCTAT GTGTGCGGCA ATGGCGGCAT GAAGCCGCGC CACGCCGAAC TGCTCGCGTC GGACCTCGAT AAGGAAACGC TGGTGCGCTA CATCGACCGT TTCCTGATGT TCTACGTGCG CACCGCAGAC CGCCTGCAAC GCACCAGCGT GTGGCGCGAG AACCTCGAAG GCGGCCTGGA TTATCTGATC GACGTGGTCG TCAACGACCA CCTGGGTGTG GCCGACGAAC TCGAGTCGGA AATGCAGCAC GTGGTCGACA CCTACGAGTG CGAATGGAAA AAGGCCGTCA CCGATCCCGA AACGCGCAAG CGCTTCCGTC ATTTCGTCAA CAGCGGCGAG TCGGACAGCA ACGTTGCGTT CGTGGAGGAA CGCGGCCAGA TCCGGCCGGC CACACCCGCC GAGCGGCGCT CGAAGCTCGC GGCGATTCCC GTTGTCGTCG AAACCGTTTG A
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Protein sequence | MKIIVIGHGM VGHKLVECLA QDAAHGLDIT VLCEESRPAY DRVHLSEFFA GKTADDLSLV EPGFFERQNV LLKLNAKAVA IDRDARTVTV STGETLPYDK LVFATGSYPF VPPVQGRERA DCFVYRTIDD LEAMRECGAR SKTGTVVGGG LLGLECAKAL RDMGLQTHVV EFAPRLMAVQ VDDGGGRVLR GKIEELGVTV HMQKNTTAIV DGEAGTHRMQ FADGSHLDTD MIVFSAGIRP RDDLARASGL TLGPRGGIVI DNACRTSDPH IYAIGECALW NGQLFGLVAP GYDMARAVAK QLLGDTAEFA GADMSTKLKL MGVDVASIGD AHGNTPGSRA YQFSDERKQV YKKLVVSECG KYLLGGVMVG DAAEYGTLLQ MMLNRIELPA SPEFLILPAA DGNAKPALGV DSLPASAQIC SCNNVSKGEL CAAVCAGATD IGALKCATTA GTSCGGCVPL VTQVMKAEMK KQGLAVNNHV CEHFAYSRQE LYHIVRVEGV RSFGELLAKH GHGLGCDICK PVVASVLASC WNEFVLKKEH ASLQDTNDYY LANIQRDGTY SVVPRMAGGE VTPDGLIAVG QVAKKYGLYT KITGGQRVDL FGARVEQLPL IWEELIAAGF ESGHAYGKSL RTVKSCVGST WCRYGVGDSV GLAVEIENRY KGLRTPHKIK FGVSGCTREC AEAQGKDVGI IATEKGWNLY VCGNGGMKPR HAELLASDLD KETLVRYIDR FLMFYVRTAD RLQRTSVWRE NLEGGLDYLI DVVVNDHLGV ADELESEMQH VVDTYECEWK KAVTDPETRK RFRHFVNSGE SDSNVAFVEE RGQIRPATPA ERRSKLAAIP VVVETV
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