| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1937 |
|---|
| Symbol | |
|---|
| ID | 6284139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 2180802 |
|---|
| End bp | 2181875 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642621503 |
|---|
| Product | folate-binding protein YgfZ |
|---|
| Protein accession | YP_001895569 |
|---|
| Protein GI | 187923927 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
|---|
| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.180565 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.508771 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATAC CGCTCGCTAC CGCTTCAGGC ACTTCCTCAG GCAACGCCGT CACGGCCGCT
GCCGCCACGC CCGCCGTTCT GCCCACGCTG CCGCGCCCTT CCGCCGATGA ATTCGACGCC
GTCATTCACC ACGGCGCGTA CATGCCGCTC ACGCAGTTCG GCGTGATCGA CGCCACCGGC
GACGACGCAG CGAGCTTCCT GCACGGCCAG TTGACCAACG ACACCCAGCA TCTCGACGCA
GCCAACGCGC GCCTCGCCGG CTACTGCTCG GCCAAGGGGC GTCTGCTCGC GTCGTTCCTG
ACGTGGCGCA GCGGCGACAC GATCCGCCTG CTGGCATCGA AAGACGTACA GGCTGCCGTG
CAGAAGCGGC TCTCCATGTT CGTGCTGCGC GCCAAGGCCA AGCTTGTGGA TGCGAGCGGC
GAACTGGCCG TGATCGGTCT CGCCGGCGAC GTGCGCAAGG CGCTCTCGGG CGTGTTCGAC
GCGCTGCCGG ACGGCGTGCA CGTGAAAGTG GACGGCGCGG CAGGCTCGCT GATTCGCGTG
CCGGACGCGC TTGGGCACCT GCGTTTTCTG TGGATCGGCC CGAAAGCACA GGTCGAGTCG
CTGCTGCCCT TGCTCGAGGA AAAACTCAAA CGCGTCTCGC CGGCCGTGTG GGATTGGCTC
GACATTCGCG CAGGCGAGCC GCGCATCACC CAGCCGGTGG TCGAGCAATT CGTGCCGCAA
ATGGTCAATT TCGACGTGCT CGGCGCGGTG AATTTCCGCA AAGGCTGCTA TCCCGGCCAG
GAAGTGGTAG CGCGCAGCCA GTATCGCGGC ACGATCAAGC GGCGCACCTC GCTCGCCAAC
GTGGCGGGCG AACTCGACAC GGTGCACGCC GGCGCGGAAC TGTTCCATTC GGACGATCCG
GGCCAGCCGT GCGGCATGGT CGTGAACGCG GCGTCGGCGC CGGACGGCGG CGTCGATGTG
CTGGTCGAGA TCAAGCTCGC GGCGCTGGAA AACGGTTCGG TGCACCTGGG CGCGGCGGAA
GGCCCGGCGC TGCGGTTTCT GCCGTTGCCC TACGGGCTGC CGACCGAAGT CTAA
|
|---|
| Protein sequence | MNIPLATASG TSSGNAVTAA AATPAVLPTL PRPSADEFDA VIHHGAYMPL TQFGVIDATG
DDAASFLHGQ LTNDTQHLDA ANARLAGYCS AKGRLLASFL TWRSGDTIRL LASKDVQAAV
QKRLSMFVLR AKAKLVDASG ELAVIGLAGD VRKALSGVFD ALPDGVHVKV DGAAGSLIRV
PDALGHLRFL WIGPKAQVES LLPLLEEKLK RVSPAVWDWL DIRAGEPRIT QPVVEQFVPQ
MVNFDVLGAV NFRKGCYPGQ EVVARSQYRG TIKRRTSLAN VAGELDTVHA GAELFHSDDP
GQPCGMVVNA ASAPDGGVDV LVEIKLAALE NGSVHLGAAE GPALRFLPLP YGLPTEV
|
|---|
| |