Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1905 |
Symbol | tig |
ID | 6284617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 2140457 |
End bp | 2141803 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642621469 |
Product | trigger factor |
Protein accession | YP_001895537 |
Protein GI | 187923895 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.205112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAACG TTGTTGAAAA CCTCGGCAAG CTCGAACGCC GCGTCACGAT TTCCCTGCCG AAGGACGCCG TGCAGAAGGA AGTGGACTCG CGTATCCGTC AACTCGCGAA GAACGTGCGC ATGCCGGGTT TCCGCCCGGG CAAGGTGCCG CTCAAGATGG TGACGCAACA GTATTCGGGC CAGGTGGAAG CCGAAGTGCT GAGCGACAAG GTCGGCAAGG AATTCTTCGA CATCAGCCGC AGCGAAAACC TGCGCGTCGC CGGTCAGCCG AGCTTCGCGC CGAAGAGCGA CGCGACTGAA GGCGACTACG CGTTCGACGC GACGTTCGAG GTGTATCCGG AAGTGAAGCT GGGCGACGTC GCCACGGCTG AAATCGAGCG CACCACGACC ACCATCAGCG AAGCGGAAAT CGACCGCACG CTGGACATCC TGCGCAAGCA GCGCGTGCAC TTCCACGCTC GCGGCGAAGC CGGCGAGCAC GGTGACGGCG GCGGCGACAC GGCAGCGAAA GAAGGCGATC GCGTGACGGT CGACTTCGTC GGCAAGATCG AGGGTGAAGT GTTCCAGGGC GGCAGCGCTG ACGACTTCGC GTTCGTGCTG GGCGAAGGCC GCATGCTGCC GGAATTCGAA AAGGCGGCAA CGGGCCTGAA GGTTGGCGAG TCGAAGGAAT TCGATCTGGC TTTCCCCGAG GACTATCATG GCAAAGATGT CGCCGGCAAG ACCGCGCAAT TCACGATCAC GATGAAGAAG ATCGAGTGGC CGCATCTGCC GGAAATCGAC GCCGAATTCG CCAAGTCGCT CGGCATCGAA GACGGCGACC TGACTAAGAT GCGCGCTGAG ATCAAAGACA ATCTCGAACG CGAAGCAAAG CGCCGCACGC AAGCCATCGT CAAGAACCAG GTGATGGACG CGTTGCTGAA GATTTCCGAA CTGGACGTGC CGAACGCGCT GATCGAACAG GATCAGGAGC GCCTCGTCGC GATGGCGCGT CAGGATCTGG AGCAACGCGG CGTGCCGAAC GCCAAAGATG CGCCGATCCC GGCTGCGATG TTCAAGGAAC AGGCTGAGCG CCGCGTGAAG CTGGGCCTCG TGCTGGCCGA ACTGGTCAAG GCCAACGAAC TGCAAGCCAA GCCGGAGCAG ATTCGTGCCG AAGTCGACGA ATTCGCGAAA AGCTACGAAG ACCCGAAGGA AGTCGTCCGC TGGTATTATT CCAACCAGCA ACGTCTTGCC GAAATGGAAG CGTACGTCGT TGAAGCCAAC GTCGTCGATT TCGTGCTCAG CAAGGCCAAG GTGACGGACA AGGAAGTGAG CTTCGAAGAA CTGGCAAGCG CAACGGCGCA AGCGTAA
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Protein sequence | MANVVENLGK LERRVTISLP KDAVQKEVDS RIRQLAKNVR MPGFRPGKVP LKMVTQQYSG QVEAEVLSDK VGKEFFDISR SENLRVAGQP SFAPKSDATE GDYAFDATFE VYPEVKLGDV ATAEIERTTT TISEAEIDRT LDILRKQRVH FHARGEAGEH GDGGGDTAAK EGDRVTVDFV GKIEGEVFQG GSADDFAFVL GEGRMLPEFE KAATGLKVGE SKEFDLAFPE DYHGKDVAGK TAQFTITMKK IEWPHLPEID AEFAKSLGIE DGDLTKMRAE IKDNLEREAK RRTQAIVKNQ VMDALLKISE LDVPNALIEQ DQERLVAMAR QDLEQRGVPN AKDAPIPAAM FKEQAERRVK LGLVLAELVK ANELQAKPEQ IRAEVDEFAK SYEDPKEVVR WYYSNQQRLA EMEAYVVEAN VVDFVLSKAK VTDKEVSFEE LASATAQA
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