| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1896 |
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| Symbol | |
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| ID | 6284407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2128444 |
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| End bp | 2129523 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642621460 |
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| Product | ABC transporter related |
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| Protein accession | YP_001895528 |
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| Protein GI | 187923886 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0892333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.42443 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTCC TGACTCTGCA AGGCATCTCG AAACGCTACG GCGATTTCAC GGCGATCGAA
CAGCTCGATC TTGCCGTCGA ACGCGGTGAA CTGCTCTCGC TGCTCGGACC GTCCGGCTGC
GGCAAGACCA CCACGCTGCA AATGGTCGCG GGCTTCATCA CGCCGACCAC GGGCCGGATT
CTGCTCGACG GCCGCGACAT CACCAACGAG CGTCCCGAGA AGCGCGGCAT CGGTGTCGTG
TTCCAGAGCT ATGCGCTGTT TCCGCACATG ACGGTGGCGG GCAACGTCGG CTTCGGGCTG
GAGATGCGCA AGGTCAGGCG CAAGGAGCGC GACGAGCGCG TCGCCGAAGC GCTTTCCCTC
GTGCGCCTGA AAGGCCTCGG CCACCGCTAT CCGAAGGAAC TGTCGGGCGG CCAGCGTCAG
CGCGTGGCGA TTGCGCGCGC CATCGCCATG CAGCCGGAAC TACTGCTGCT CGACGAGCCG
ATGTCGAACC TCGACGCCAA GCTGCGCGAA GAGATGCACA TCGAACTGCG CGCGATCCAG
AAGCGCCTCG GCATCACGAC GATTCTCGTC ACGCACGATC AGGTCGAAGC GATGACCATG
AGCGACCGCA TCGCGGTGAT GCATCGCGGC GTGATTGCGC AACTGAGCAC GCCGTATGAC
GCGTACGAGC GCCCCGCCAC GCCGTTCGCC TCGACGTTTC TCGGACGCAC CAACGCGTTT
TCCGGCGAAG TGCTGCGGCG CAACCCGCGC TGCGCCGAAG TCGACGTCGC GGGCACGACG
CTGCATGTGC CGCACGAAGG CCGTCATGTG GACGGCACGG TGAACGTCTA TATCCGCCCG
GAAAAGGTTC ATCTGGCCAA TGGCGATGCG CGACTGCGCG GGCGCATCGC GACGCGCGTG
TTCGTCGGCA ATCAATGGCT GCTCGAAGTG GATACCGAAC TCGGCAAGTT GCGCATCGCG
CAACCGAACC ACGGCGCGCC GCCGCCCGAG GAAGGCCACG AAGTCGGCCT CGCATGGACC
GACGACGACC TGCGCGTGCT CACGCAAGAC ACTCCGGAGA GCGCTCATGG CCACGCTTGA
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| Protein sequence | MAFLTLQGIS KRYGDFTAIE QLDLAVERGE LLSLLGPSGC GKTTTLQMVA GFITPTTGRI
LLDGRDITNE RPEKRGIGVV FQSYALFPHM TVAGNVGFGL EMRKVRRKER DERVAEALSL
VRLKGLGHRY PKELSGGQRQ RVAIARAIAM QPELLLLDEP MSNLDAKLRE EMHIELRAIQ
KRLGITTILV THDQVEAMTM SDRIAVMHRG VIAQLSTPYD AYERPATPFA STFLGRTNAF
SGEVLRRNPR CAEVDVAGTT LHVPHEGRHV DGTVNVYIRP EKVHLANGDA RLRGRIATRV
FVGNQWLLEV DTELGKLRIA QPNHGAPPPE EGHEVGLAWT DDDLRVLTQD TPESAHGHA
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