| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1873 |
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| Symbol | |
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| ID | 6284114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2103355 |
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| End bp | 2104569 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642621436 |
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| Product | acetylornithine deacetylase |
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| Protein accession | YP_001895505 |
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| Protein GI | 187923863 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0968397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.014477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCATG TCGCTGAAAC AGCGCAGTCC ACCTCGTCAT CTCCCGTTTC GCTCCCGTGG
GTCACCCGTC TCGTGTCGAT GGACACGGTC AGCCGCAACC CGAATCTCGG CCTGATCGAA
ACCGTGCGCG ACGAACTGCG CGCGGTCGGC GTCGAGGCCA CGCTCACGCA CGACGAAAGC
GGCAAATGGG CCAACCTGTT CGCGACAATT CCCGCGCACA ACGGTGAAAC GAACGGCGGC
GTGGTGCTGT CGGGCCACAC CGACGTGGTG CCCGTAGACG GCCAGCAATG GGACAGCGAT
CCGTTCAAGC CGGAGATTCG CGGCGACAAG CTATACGGCC GCGGCACCTG CGATATGAAA
GGCTTCATCG GCGCGGCGCT GACGCTTGTG CCGGAGATGC AACGCACCAA ACTCGCCAAA
CCGATCCACT TCGCGCTGTC GTTCGACGAG GAAGTGGGCT GCGCCGGCGC GCCGCTCCTG
ATCGCCGACC TGATGAAGCG CGGCGTGAAG CCGGATGGCT GCATCGTCGG CGAACCGACC
AGCATGCGGC CTATCGTGGC GCACAAAGGC ATCAACGCCT ACCAGTGCTG CGTGCGCGGT
CAGGCGGCGC ATTCGTCGCT GACGCCGAAG GGTTTGAACG CGATCGAATA CGCCGCGCGT
CTGATCTGCT ACATCCGCGA CATGGCCGAC CAGTTCCGCG AGCAAGGCCC GTTCGACGAA
CTGTACGACG TGCCCTTCAC CACCGCGCAA ACCAGCACGA TCGTCGGCGG CAATGCGATC
AATACCGTGC CGGCCGAATG CAAGTTCCAG TTCGAATTCC GCAATCTGCC CACGCTCGAT
CCCGAGCCGA TTTTCGCGCG CATCGATCAA TACGCTCGCG AAACGCTGCT GCCGAAAATG
TTGCGCGAGC ATCCATCGGC GGCAATCGAG ATCACGAAGA TCGCCGCCGC GCCCGGACTC
GATTCGTCTG AACAAGCCGC CATCACGCAA CTGGTGCGGG CGTTGACCGC CGATCAGGAC
AAGCGCAAGG TTGCCTATGG CACGGAAGCC GGTCTGTTTT CGCTGGCGGG CATTCCGAGC
ATCGTCTGCG GCCCCGGCGA CATTCAGCAG GCGCACAAGC CCAATGAGTT CGTCGCGCTG
GATCAACTGG TGGCGTGCGA GCGCTTCCTG CAAAAATTCA TTCACAGCAT GTCGGTCGAC
GCGCACGCGC ACTGA
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| Protein sequence | MSHVAETAQS TSSSPVSLPW VTRLVSMDTV SRNPNLGLIE TVRDELRAVG VEATLTHDES
GKWANLFATI PAHNGETNGG VVLSGHTDVV PVDGQQWDSD PFKPEIRGDK LYGRGTCDMK
GFIGAALTLV PEMQRTKLAK PIHFALSFDE EVGCAGAPLL IADLMKRGVK PDGCIVGEPT
SMRPIVAHKG INAYQCCVRG QAAHSSLTPK GLNAIEYAAR LICYIRDMAD QFREQGPFDE
LYDVPFTTAQ TSTIVGGNAI NTVPAECKFQ FEFRNLPTLD PEPIFARIDQ YARETLLPKM
LREHPSAAIE ITKIAAAPGL DSSEQAAITQ LVRALTADQD KRKVAYGTEA GLFSLAGIPS
IVCGPGDIQQ AHKPNEFVAL DQLVACERFL QKFIHSMSVD AHAH
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