| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1870 |
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| Symbol | |
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| ID | 6284111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2099645 |
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| End bp | 2101618 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642621433 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001895502 |
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| Protein GI | 187923860 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.240453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0267746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG AAGTGTCCAC GCAGCCCGCC GCCTACGTGC TGGTCGTCGA TGACGACGAA
GGCATCCTGC GGCTCGCGCG CAAGTCGCTC GAGCGCGCCG GCTGCCGGGT CGCGATCTGC
GCCGGCGTCG AAGCGGCTCG TGAACGGCTC GCGGGCGGCG GTCCCGACCT GCTGGTGCTC
GACTATCAGT TGAACGGGCC CGAGACCGGC CTGGACTTCT TTCGCCGTCT GCGCGCGGAA
GGCGTGCGGA TTCCCGCCAT CCTCGTGACC GGTTTTACCG ACGAATCGCG TGTCATCGAA
GCGTTGCGCG CGGGCGTGTC CGATGTCGTG CCGAAATCCG GCGATTACCT CGATTACCTG
CCCGAAGCCG TCGAACGGGT GCTCTCGCAA GTGCGCCTGC AGCGCGCGTC GGACGAAGCC
TTGCTGCTGC GCGATCGCGA GCAGCATTAC CGCACCTTGT CGGAGGCGCT GCCGCACCTC
GTGATGACCT GCAACGCCAC GGGCGACTGC GATTTTCTGT CGAAGCAGTG GTACGACTAC
ACGGGCCTCG CTGAAAGCTG TTCGTACGGT CTCGCCTGGC TCGACGCCGT GCATCCGGAC
GACCGCGAAA AGATTCGCCG CAGCTGGCTC AAAACGGTGT CGGGCGACGC CGGCGACTAC
CGGCAGGAGT TGCGGATTCG CCGTCACGAC GGCGAATACC GCTGGTTCGA CTTGCGCGTG
GTAGCGATGC GCGACGCCGA AGGCAACGTC AGCAAATGGT TCGGCAGTTG CACGGACATT
CATTCGCAGC GCGAGGCGAT CGAGGAGCGC GAACGGCTGC TGGCGTCGGA GCAGGCCGCC
CGCCAGACCG CCGAAGAAGC CAATCGCGCC AAAGACCGCT TTCTGGCCAT GCTGTCGCAC
GAATTGCGCA CGCCGCTCAC GCCGGTGCTG GCCGGCGCCA GCGTGCTGGA AATGATTCCG
GGTCTGCCCG ATCAGGCGCG GGCGAGCGTG CGCATGATCC GCCGCAACGT CGAACTCGAA
GCACGGCTGA TCGACGACCT GCTCGATCTC ACGCGCGTGG CGAACGGCAA GCTGCGGCTT
TCGCTGGAAA CCGTCGACGT GCACGACGTG ATCGACAGCG TGCTCGAACT GTTTCGCAGC
GAGATTCAGG TCAAGCAGCA GGACGTGCAC GTCCATAAGG ACGCGCAGCA TCATTACGTG
CTGGCCGATC GCGCACGGCT GCAGCAAATG CTGTGGAACC TGATTCGCAA CGCCGCCAAG
TTCACGCCGG ATGGCGGCCA TATCTATGTG CGCACGCGCG ACGAACGCAT GCACGTGCAG
ATATCGGTTG AAGACACGGG GATCGGCATC GAGCCGGATC AGATCGGCAA ACTCTTCAAC
GCGTTCGAGC AGGGCAACCA GAACATGACG CGGCAGTTCG GCGGACTCGG CCTCGGACTC
GCGATCACGA AGGCGTTGAC CGACGTGCAT GGCGGCACCG TGACCGCGCA GAGTCCGGGC
GCGCACTGCG GCGCGACCTT CGCAATCACC TTGCCGACGG CCGCGGCGCC GGAGGTGACT
TCACCAGTCG TGGTGCCCGA CGAAGTGCAT TCGGGCGGCC TGCTGAACAT CCTGCTGATC
GAAGATCATG TGGACACGGC CGAGGTCATG GAGCAACTGA TTCGCAGCCT CGGCCATGAA
GTCACGACGG TGGGCCGCGT CGACGATGCG TTGGCCGCGA CGCAATCGCA GACCTTCGAT
CTGATCGTCA GCGACGTCGG ATTGCCCGAC GGCACCGGTC TCGACTTCAT CCAGGCGTTC
CGCGAACACT CGGACGCGCC CGCGGTCGCG CTGACCGGCT TCGGCACCGA CGAAGACGTG
CGCCGTTGCC TGAGCGCCGG CTTCACCTCG CATCTGACCA AGCCGGTCAA CTTCAGCCAG
CTCGAGGCGA TGATCGAAGG CGCGGTGACT CTGAAGGAGC AGCGCGACGC GTGA
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| Protein sequence | MTDEVSTQPA AYVLVVDDDE GILRLARKSL ERAGCRVAIC AGVEAARERL AGGGPDLLVL
DYQLNGPETG LDFFRRLRAE GVRIPAILVT GFTDESRVIE ALRAGVSDVV PKSGDYLDYL
PEAVERVLSQ VRLQRASDEA LLLRDREQHY RTLSEALPHL VMTCNATGDC DFLSKQWYDY
TGLAESCSYG LAWLDAVHPD DREKIRRSWL KTVSGDAGDY RQELRIRRHD GEYRWFDLRV
VAMRDAEGNV SKWFGSCTDI HSQREAIEER ERLLASEQAA RQTAEEANRA KDRFLAMLSH
ELRTPLTPVL AGASVLEMIP GLPDQARASV RMIRRNVELE ARLIDDLLDL TRVANGKLRL
SLETVDVHDV IDSVLELFRS EIQVKQQDVH VHKDAQHHYV LADRARLQQM LWNLIRNAAK
FTPDGGHIYV RTRDERMHVQ ISVEDTGIGI EPDQIGKLFN AFEQGNQNMT RQFGGLGLGL
AITKALTDVH GGTVTAQSPG AHCGATFAIT LPTAAAPEVT SPVVVPDEVH SGGLLNILLI
EDHVDTAEVM EQLIRSLGHE VTTVGRVDDA LAATQSQTFD LIVSDVGLPD GTGLDFIQAF
REHSDAPAVA LTGFGTDEDV RRCLSAGFTS HLTKPVNFSQ LEAMIEGAVT LKEQRDA
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