Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1821 |
Symbol | |
ID | 6284220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2043454 |
End bp | 2044290 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642621384 |
Product | protein of unknown function DUF980 |
Protein accession | YP_001895453 |
Protein GI | 187923811 |
COG category | [S] Function unknown |
COG ID | [COG3228] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.571233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0506575 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTCGA AACTGACTCA ATGGTTCGGC ACACGCCGGC GCGAGCGCGC GCTACGCGAC TACGCGATCG ACGATTCGCT CTGGCAAGCC ACGCTCGACG GCCTGCCATT CCTCGCGCGC CTCGCTGCGC CGGACCTCGT GCGTTTGCGC GAACTGACGA GCCTGTTCCT CGCGCAAAAA GAATTTTCGA CCGCGCACGA ACTCGAACTC ACCGACGCGA TGACCGTGGC GATCGCCGCC CAGGCTTGCT TGCCGGTGCT GAACCTGAGC CTCGATCTGT ATCGCGGCTG GGTCGGCGTG ATCGTCTATC CGGGCGAGTT CGTGATCCGC AAGACGGTCG AGGATCAGGA CGGCGTCGTG CACGAAGTCG AACAGGATGC GAGCGGCGAA GCATGGGAAG GCGGGCCGGT CGTGCTGTCG TGGGAAGACG CGCAAATGAC GGACGGCTCG GACGCCTACA ACGTCGTGAT TCACGAATTC GCGCACAAGA TCGACATGCT GAACGGCGAA GCGGACGGCC ACCCGCCGCT TATGCGCCGC TGGCATGCGC CGCTCGATTC CCAGGCTTGG GCCGACGTGT TCGACCATGC TTACGACCAC TTCTGCGCCA GGGTCGACGC AGTGCTGGAG CGTCGCTGGG CGCGCTTCGA GCGCGACTCG CTGATCGATC CGTACGCGGC GGATCATCCG TCGGAATTTT TTGCCGTTTG CAGCGAGGCG CTATTCGTTC AGCCGGAGGC ATTCGAAGCC GAGTATCCGC AGCTTTACCG GCTGCTCGCG CAGTATTACC GGCAGGATCC GGCACGGGTC GGTATGACGT TCACGCCGCC CGCCTGA
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Protein sequence | MLSKLTQWFG TRRRERALRD YAIDDSLWQA TLDGLPFLAR LAAPDLVRLR ELTSLFLAQK EFSTAHELEL TDAMTVAIAA QACLPVLNLS LDLYRGWVGV IVYPGEFVIR KTVEDQDGVV HEVEQDASGE AWEGGPVVLS WEDAQMTDGS DAYNVVIHEF AHKIDMLNGE ADGHPPLMRR WHAPLDSQAW ADVFDHAYDH FCARVDAVLE RRWARFERDS LIDPYAADHP SEFFAVCSEA LFVQPEAFEA EYPQLYRLLA QYYRQDPARV GMTFTPPA
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