| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1819 |
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| Symbol | |
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| ID | 6284218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2040900 |
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| End bp | 2042705 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642621382 |
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| Product | putative inner membrane protein |
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| Protein accession | YP_001895451 |
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| Protein GI | 187923809 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.041941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCCG GCCCTGGCTG CACCGCTTAT CCAATATCCA CACACCGCAT GAGACCTGTC
GTTCGCCTCA CTGCCTCAGC GACCAGTGCG TTGCCGCGCT GGCTGCTGCT GACCATCTGT
ATCGTCTACG CATCGTTCGG ACTCTTCGGC CGCGATCCGT GGAAGAACGA GGATGCAGCC
GGCTTCGGCG TCATGTGGAC CATGGCGAAC GGCGGCGCGC ACGACTGGCT GCTGCCGAAT
CTGGTCGGCA AATACCTCAC TGAAGACGGC CCGCTCGGCT ACTGGTTCGG CGCCAGCGCG
ATCCGCCTGC TCGCGCCGTG GGTCGACGCG AGCAACGCAT CGCGCGTCTT CACGGGCCTG
ATGTTCTGCG CGGGCTGCGC GTTCGTCTGG TATGCGGCTT ACCTGCTCGG CCGGCGCGCC
GAAGTCCAGC CATTCAAATA CGCGTTCGGC GGCGAGCCGG AGCCGCGCGA TTACGGCCGC
ACGCTCGCCG ACGGCGCGCT GCTGATCCTG CTCGCCTGCT TCGGCCTTGC CGAGCGCGGC
CACGAAACTA CGCCGCAACT CGCACAATTC TTCGGCATCG CGATGCTCGT GTACGGGCTC
GTGCGCATGA TCGACAAGCC GATTCAGGGC GCGCTGATCT GGGGTCTCGC CATCGCCCTC
GTCACTCTGG CGAGCAGCCC GGTGCTGGTC GGCGCGCTGC TGCTCGGCAC GCTGGCGATG
ACGCTGATCG TGCGCGAAAC GCGCTCGCGC TGGCTGCTGC TGGCGGGTCT GCCGGTGGCG
CTCGTGCTGT CCGTGGCGTG GCCGATCGCC GCGCTCGCCG CCTTCCCCGT CGACGCCGTC
TGGTACCTCA ATCAATGGGT GCACGTCAGC TTGAGCTCCT TCGCCGGGCC GCCCGGCTCG
GTCGCCGGCT ATGCGCTGAA AAACCTGCCG CTTTTCACGT GGCCGGCATG GCCGCTGGCA
CTGTGGGCGT GGTTCAGCTG GTCGGGGCTG CGGCGCGCGC CGCACGTGGC CATTCCGCTT
TCGGTGATCG GGCCGCTGTT CGTGCTGGTC GTGCTGCAGA GCCATCAATC GAACCGGCTC
TACATGTTGC TGCTACCGCC GCTCGCGGTG CTGGCCGCGT TCGCGCTGCC CACGCTCAAG
CGCGGCGCGA TCAACGCAAT CGACTGGTTC GCGCTCCTGA GCTTCACGAT TCTCGGCAGC
TTCGTCTGGC TGGTTTATAT CGCGGGCTTG ACCGGCTTCC CGCATCCGCT CGCGCGCAAT
CTCGCGCGTC TCGCGCCGGG CTTCGCGCCG CAGTTCAAGA TCCTGTCGTT CGTGTGCGCG
GTCGCCGTGA CGGTCTGCTG GTTCGTGCTG GTGCAGTGGC GGCTCGCGCG CCATCCGAAA
GTCTTGTGGC GCAGCGTGGT GCTCTCGAGC GCCGGCACCA CCCTCATGTG GGTGCTGCTC
ATGACGCTGT GGCTGCCGGT CGTCAACTAC AGCCGGACCT ATAAGGACGT CGCCGAACAG
ATCGCCGCCC ATCTGCCGGA CGACTACACC TGCATCTCGC CGGTGCGCCT CGGCAATGCG
CAGATCGCGA CCTTCGCTTA TTTCGGCGAC ATGCACTTCT CCTTCGACCA GGACTGCGAC
GTGATCCTGC GTCAGGATAC GCAGGACTAC GGCGAACCGA GCGCGATGTC CGACTTCGTC
TGGAAGCTGG TGTGGGAAGG CCGCCGCGTG GCCGACCGCG ACGAACGCTT CCGTCTGTAC
GTGCGCATCG ACCGTCCGAA GCCGCCGGTC GTCAAACGCC GCAGCTGGCA CAAGAAGTCC
GACTGA
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| Protein sequence | MPSGPGCTAY PISTHRMRPV VRLTASATSA LPRWLLLTIC IVYASFGLFG RDPWKNEDAA
GFGVMWTMAN GGAHDWLLPN LVGKYLTEDG PLGYWFGASA IRLLAPWVDA SNASRVFTGL
MFCAGCAFVW YAAYLLGRRA EVQPFKYAFG GEPEPRDYGR TLADGALLIL LACFGLAERG
HETTPQLAQF FGIAMLVYGL VRMIDKPIQG ALIWGLAIAL VTLASSPVLV GALLLGTLAM
TLIVRETRSR WLLLAGLPVA LVLSVAWPIA ALAAFPVDAV WYLNQWVHVS LSSFAGPPGS
VAGYALKNLP LFTWPAWPLA LWAWFSWSGL RRAPHVAIPL SVIGPLFVLV VLQSHQSNRL
YMLLLPPLAV LAAFALPTLK RGAINAIDWF ALLSFTILGS FVWLVYIAGL TGFPHPLARN
LARLAPGFAP QFKILSFVCA VAVTVCWFVL VQWRLARHPK VLWRSVVLSS AGTTLMWVLL
MTLWLPVVNY SRTYKDVAEQ IAAHLPDDYT CISPVRLGNA QIATFAYFGD MHFSFDQDCD
VILRQDTQDY GEPSAMSDFV WKLVWEGRRV ADRDERFRLY VRIDRPKPPV VKRRSWHKKS
D
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