Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1799 |
Symbol | |
ID | 6282135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2019078 |
End bp | 2020013 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642621362 |
Product | putative formyltransferase |
Protein accession | YP_001895431 |
Protein GI | 187923789 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0223] Methionyl-tRNA formyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0092642 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAGCCAC GCGCCGTCGT ATTCGCGTAT CACAACGTCG GCGTGCGCTG CCTGCAGGTG CTGCTCGCGC GCGGCGTGGA CGTGGCGCTC GTCGTTACGC ACGAAGACAA TCCGAGCGAA AACATCTGGT TCGGCAGCGT CGCCTCGGTT GCCGCCGAGC ACGGCATTCC GGTCGTCACG CCGAGCGATC CGAAGAGCCC CGAGTTGCGC GCCGCGGTGA GCGCCGCGCG CCCGGATTTC ATCTTCTCGT TCTACTACCG CCACATGTTG CCGGCCGACG TGCTGGCGCT CGCCGCACGA GGCGCTTACA ACATGCACGG CTCGCTGCTG CCGAAGTACC GCGGGCGCGT GCCGACCAAC TGGGCGGTGA TTCACGGCGA AACGGAAACC GGCGCGACGC TGCACGAAAT GGCCGCCAAG CCGGACGCGG GCGCGATCCT CGCTCAAACG CCGGTGCCGA TCCTGCCCGA CGACACCGCC GCGCAAGTCT TCGACAAGGT CACCGTGGCC GCCGAGCAAA CGCTGTGGCG CGTGCTGCCG TCCCTGCTGG CGGGCGAGGC GCCGCATCTG CCGAACGACA TCGCGCAGGG CAGCTATTAC GGCGGCCGCA AGCCGGAAGA CGGCCGCATC GACTGGACGC AAACGGCGCA GCAGGTCTAC AACCTGATCC GCGCGGTCGC GCCGCCCTAC CCTGGCGCTT TCACGGATAT CGGCGAGCGG CGTTTCATCG TCGCGCGCGC GCGCCTGGCC GTGCCCGGCG CGCTTCGCTC GGATTTGCCC CCGGGCCTGC ACGTAAGCGA TAATGCCGTT TTCGCGATAT GCGGCGACGG CCGCGCGATC GCCATCCACG AATTGCGGCA CCAGCACGAC GGCAGCGAGA CTGTCGTCAC TCCGGCCGAA TTTGCCCAGC TCATCCAAAC TCCCCGTCAT CAATGA
|
Protein sequence | MKPRAVVFAY HNVGVRCLQV LLARGVDVAL VVTHEDNPSE NIWFGSVASV AAEHGIPVVT PSDPKSPELR AAVSAARPDF IFSFYYRHML PADVLALAAR GAYNMHGSLL PKYRGRVPTN WAVIHGETET GATLHEMAAK PDAGAILAQT PVPILPDDTA AQVFDKVTVA AEQTLWRVLP SLLAGEAPHL PNDIAQGSYY GGRKPEDGRI DWTQTAQQVY NLIRAVAPPY PGAFTDIGER RFIVARARLA VPGALRSDLP PGLHVSDNAV FAICGDGRAI AIHELRHQHD GSETVVTPAE FAQLIQTPRH Q
|
| |