| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1798 |
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| Symbol | |
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| ID | 6282134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2018035 |
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| End bp | 2019081 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642621361 |
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| Product | NAD-dependent epimerase/dehydratase family protein |
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| Protein accession | YP_001895430 |
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| Protein GI | 187923788 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.392449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00970837 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAG TCCTGATTCT GGGTGTGAAC GGCTTCATCG GCCATCACCT GTCCAAGCGC
ATTCTCGAAA CGACCGATTG GGAAGTGTTC GGGATGGACA TGCAGACCGA ACGTCTGGGC
GACCTCATCA ATCATGAACG GATGCACTTC TTCGAAGGCG ACATCACGAT CAACAAGGAG
TGGGTCGAAT ATCACGTCAA GAAGTGCGAT GTGATCCTGC CGCTGGTCGC GATCGCCACG
CCCGCCACTT ACGTGAAGCA GCCGTTGCGC GTGTTCGAAC TGGATTTCGA GGCGAACCTG
CCGATCGTGC GTTCGGCCGT CAAGTACGGC AAGCACCTCG TGTTTCCGTC CACGTCCGAG
GTCTACGGCA TGTGCACGGA CGAGCAGTTC GATCCGGAAG AGTCGCAACT GTCGTACGGC
CCGATCAACA AGCCGCGCTG GATCTACGCC TGCTCCAAGC AGTTGATGGA CCGCGTGATC
TGGGGTTACG GCATGGAAGG CCTGAACTTC ACGCTGTTCC GTCCGTTCAA CTGGATCGGC
CCGGGCCTCG ACTCGATCTA CACGCCGAAG GAAGGCAGCT CCCGCGTGGT AACGCAGTTC
CTCGGCCATA TCGTGCGCGG CGAGAACATC AGCCTCGTCG ATGGCGGCGC GCAAAAGCGT
GCGTTCACGG ATATCGACGA CGGCATCGGC GCGCTGATGA AGATCATCGA GAACAAGGAC
GGCGTCGCCA CGGGCAAGAT CTACAACATC GGCAACCCGA CCAACAATTT CTCGGTGCGT
GAACTCGCGC ACAAGATGCT GACGCTCGCC GCCGAATTCC CCGAATACGC GGACACGGCC
AAGCAGGTGC AACTGGTTGA AACCTCGTCG GGCGCATACT ACGGCGCGGG CTACCAGGAC
GTGCAGAACC GCGTGCCGAA GATCGACAAC ACGATGCAGG AACTCGACTG GGCGCCGAAG
TCGACCTTCG ACGAAGCACT GCGCAAGATT TTCGAAGCGT ATCGCGGCCA CGTCGGCGAA
GCGCGCGCGC TCGTCGAACA GCAATAA
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| Protein sequence | MKKVLILGVN GFIGHHLSKR ILETTDWEVF GMDMQTERLG DLINHERMHF FEGDITINKE
WVEYHVKKCD VILPLVAIAT PATYVKQPLR VFELDFEANL PIVRSAVKYG KHLVFPSTSE
VYGMCTDEQF DPEESQLSYG PINKPRWIYA CSKQLMDRVI WGYGMEGLNF TLFRPFNWIG
PGLDSIYTPK EGSSRVVTQF LGHIVRGENI SLVDGGAQKR AFTDIDDGIG ALMKIIENKD
GVATGKIYNI GNPTNNFSVR ELAHKMLTLA AEFPEYADTA KQVQLVETSS GAYYGAGYQD
VQNRVPKIDN TMQELDWAPK STFDEALRKI FEAYRGHVGE ARALVEQQ
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