| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1793 |
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| Symbol | |
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| ID | 6282707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2011711 |
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| End bp | 2012517 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642621356 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001895425 |
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| Protein GI | 187923783 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.152096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0130851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTCG GGCTCAAAGA CAAGGTGGTA TTGATCACGG GCGGCAGCAA GGGAATCGGG
TTCGCTTGCG CCCGCGCGTT TGCGCTCGAG GGCGCGAAAG TCGCGATCGT GTCGCGCGAT
CCCGCCAACC TCGCACGCGC TTTCGAGCAG TTGAAGCAGG AAGGCCTGCA CGTGCACCGA
ACCCGCGCCG ATCTGCACGA ACCGCACAGC GCCGCCGATA TCGTCGAAGA AGTCAGCACC
GCGGTCGGTC CGATCGACAT ACTGATCAAC AGCGCCGGCG CCGCGCGCCG CTACGACCCG
GAAACGCTCG ACGCCGACGC GTTCCGCGCC ACCATGGAAG CGAAATACTT CCCCTACATC
TATCCCCAGC AGGAAGTACT GCGCCGCATG GCCGAGCGCG TCAAGGCCGG CAACGGCGGC
GAGCCAGGCG CCGTCGTCAA CATCATCGGC ATGGGCGGCA AGATCGCGAG CGATATCCAT
ATTGCCGGTG GCGCCGCGAA CGCCGCGCTG ATGCTCGCCA CCGTCGGCCT CGCCCACTAT
TACGCGCGTT ACGGCATCCG CATCAACGCG ATCAATCCCG GCGCGACCCT AACCGAGCGT
ATCGAGGAAG CGGTCAAGCT GGAAGCCACG CAGCAAGGCA TCGAGAGCGC GGAAGCGCTC
GCGCGCGGGC AGGCCAAAGT GCCGCTCGGA CGCTTTGCCA AACCGGAGGA AATTGCCGAC
GTCGCGCTGT TCTTGGCGAG CCGCCGCGCG AGCTATGTGA CGGGCGCGAT CGTCCCGATG
GATGGAGCCA GCGCGCCGCT AATCTAG
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| Protein sequence | MDLGLKDKVV LITGGSKGIG FACARAFALE GAKVAIVSRD PANLARAFEQ LKQEGLHVHR
TRADLHEPHS AADIVEEVST AVGPIDILIN SAGAARRYDP ETLDADAFRA TMEAKYFPYI
YPQQEVLRRM AERVKAGNGG EPGAVVNIIG MGGKIASDIH IAGGAANAAL MLATVGLAHY
YARYGIRINA INPGATLTER IEEAVKLEAT QQGIESAEAL ARGQAKVPLG RFAKPEEIAD
VALFLASRRA SYVTGAIVPM DGASAPLI
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