| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1788 |
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| Symbol | rpsR |
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| ID | 6283570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2007591 |
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| End bp | 2007866 |
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| Gene Length | 276 bp |
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| Protein Length | 91 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642621351 |
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| Product | 30S ribosomal protein S18 |
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| Protein accession | YP_001895420 |
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| Protein GI | 187923778 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0238] Ribosomal protein S18 |
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| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.685938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.111131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCCGCC CGACTGGTAA GAAATTCGAC AAGCGTCGTC AGCAACAAAA TCCGCTCTTC
AAGCGCAAGA AGTTCTGCCG TTTCACGGCC GCTAATGTCG ATCATATCGA CTACAAGGAC
CTCGAAACGC TGAAGGACTT CATCGGCGAA AACGGCAAGA TCACGCCGGC GCGTCTCACG
GGTACGAAGT CGCACTATCA ACGCCAGCTG GATACGGCAA TCAAGCGCGC ACGTTTCCTC
GCGCTGGTGC CGTACACCGA CCAGCACAAG GCCTAA
|
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| Protein sequence | MPRPTGKKFD KRRQQQNPLF KRKKFCRFTA ANVDHIDYKD LETLKDFIGE NGKITPARLT
GTKSHYQRQL DTAIKRARFL ALVPYTDQHK A
|
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