| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1785 |
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| Symbol | |
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| ID | 6283567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2005634 |
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| End bp | 2006569 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642621348 |
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| Product | putative transmembrane anti-sigma factor |
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| Protein accession | YP_001895417 |
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| Protein GI | 187923775 |
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| COG category | [K] Transcription |
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| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.1097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.379746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTGTA ATGAAGCGCG GCCGCTCCTC GACGCGAACG CCGATCACGA ATTGCCCGCG
CCGGATGCCC GGCGTGTTCA GCAGCACATC GAGAGCTGCG ACGGCTGCCG GCGCGAAAGC
GAGAACCTGC GGGCCTTGAG CGGCGCGGTG CGGGCGGCGC CTTACCATCG TGCGCCGCAG
TCGCTGCGCG AGCGGATCAT CGCGGGATTG CCGTCCGTCG ACGAGCCGGT CGCGGCGGCC
GAGGCGTCCG AGGTGCCGCT TGCCCATGTC GAGGCGCCGC CGCGCGAACG TGCGCGGCGC
GGCTGGCTCG ATCGTTTGCT GGACGGCATG CGGGCGCCGC AAGGTGGCTT CGGCTTGCCG
ACGGGCGCGG GCGGCGGCGC GGTCGGATCA GGCGGCGTGT TCGGGCGCGG CTGGCTGATG
GTGCTGGTGC TCGTGCTGGG CGCGGCGGCG GCGGGCGTGG CGCTGAACCT GCGCCGGCCG
GCGGACTTCG GACCGTTCGC CGACGAGCTG ATAGAAAGCC ACGTGCGCGC GCAGGTCTCA
GGGCGCGACA TCGACGTGAT TTCGACGGAT CGGCATACCG TCAAGCCCTG GTTCAACGGC
CGGCTGGACT ATTCGCCGCC GGTCGAGGAT CTCGCGGCGA ACGGCTTCGC GCTGGAGGGC
GGCCGCCTCG ATTACCTCGC GCATCAGCGG GTGGCCGTGC TGGTGTACCG CTACCAGAAG
CACGTGATCG ACGTGTACGT CTTTCCGCAG ACCGCCGCCA GCGGCACGGT GCCGGCGACG
CTGGGCCGCG AAGGCTATTC GATTGCGCAC TGGAACGCGG AAGGCATGAC CTGGTGGGCG
ATCTCGGACG CCGCGCCGGA TGCGCTGAAG GGGCTGGAAG TGGCGCTGAA GGCGCGTCTG
CAAAGCGGCA GCGAGCGCAC GGAAGCGGGC TCATAG
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| Protein sequence | MDCNEARPLL DANADHELPA PDARRVQQHI ESCDGCRRES ENLRALSGAV RAAPYHRAPQ
SLRERIIAGL PSVDEPVAAA EASEVPLAHV EAPPRERARR GWLDRLLDGM RAPQGGFGLP
TGAGGGAVGS GGVFGRGWLM VLVLVLGAAA AGVALNLRRP ADFGPFADEL IESHVRAQVS
GRDIDVISTD RHTVKPWFNG RLDYSPPVED LAANGFALEG GRLDYLAHQR VAVLVYRYQK
HVIDVYVFPQ TAASGTVPAT LGREGYSIAH WNAEGMTWWA ISDAAPDALK GLEVALKARL
QSGSERTEAG S
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