Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1759 |
Symbol | |
ID | 6280825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1979750 |
End bp | 1980400 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642621322 |
Product | protein of unknown function UPF0126 |
Protein accession | YP_001895391 |
Protein GI | 187923749 |
COG category | [S] Function unknown |
COG ID | [COG2860] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.580301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGACAT TGTCGATACG AAAAATCAGG CTGAACGTCG AAACACTGGT GCTCGCAGCC GACCTGGCGG GCACGGTGGT GTTCGCGCTC GAGGGTGCGC TCAGCGCGAT CCACGGCGGT CTCGACCTGT TGGGCGTGAT GGTGATTGCG TTTGTCGCGG CGCTCGGCGG CGGCGTGATT CGCGATCTGC TGATCGGCGA TTCGCCGCCG AACGCGATCC GCGACTGGCG CTATCCGGCG CTCACCTTCA TCACCGGGTT GCTCACCTTT ATCTTCCATT CGACAGCGCA GCAGTTTCCC GTTGCGCTCG TCACCGTGCT CGACGCGGCG GGCCTCGCGC TGTTTGCCGT GGCGGGCGTG GAAAAAGCGC TGCTGTTCGG CATCCGTCCG TTTATCGCGA TGTTGATGGG CACGGTCACG GGCGTGGGCG GCGGGGTGAT ACGCGACGTG CTGCTGGCAC GCGTGCCGCT CGTCCTGCAT GCCGACATCT ATGCAACGGC CGCGTTCGCG GGGGCGTTCA TCGTGGTGGT GGCGCGTCGT GCCGGTCTGC CGCCTGGCGC GGCAGCGTTG GCGGGCGGTT CGGCGTGCTT CGTCTTGCGC GTGCTCGCCG TGACTTACGG CTGGCATCTG CCGAAGGTGG CGCCGGTTTG A
|
Protein sequence | MPTLSIRKIR LNVETLVLAA DLAGTVVFAL EGALSAIHGG LDLLGVMVIA FVAALGGGVI RDLLIGDSPP NAIRDWRYPA LTFITGLLTF IFHSTAQQFP VALVTVLDAA GLALFAVAGV EKALLFGIRP FIAMLMGTVT GVGGGVIRDV LLARVPLVLH ADIYATAAFA GAFIVVVARR AGLPPGAAAL AGGSACFVLR VLAVTYGWHL PKVAPV
|
| |