| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1745 |
|---|
| Symbol | |
|---|
| ID | 6281360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 1970435 |
|---|
| End bp | 1971277 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642621307 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001895377 |
|---|
| Protein GI | 187923735 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAT CCACTGTGAG CGCCGCGCGG CATGAAGGCG CCGAGGCCGG CTCGGGTTTG
AACACGTTGC GCCGGGTTGG CGCGCATCTC GCGCCGTGGC TCGCGCCGCT CGCGATTCTG
CTGGCGTGGG AATTCGCCGC GCGGAGCGGC GTGCTGTCGA CGCGCGTGCT CCCTGAACCG
CTCGCGGTCG TCAAGGCCGC GTGGTCGCTG ATCCAGTCCG GCGAAATGTG GACGGACGTG
AAGGTCAGCA CGTGGCGCGC GGTGTCGGGT TTTGCGATCG GGGGCGGCAT CGGCCTCGTG
CTCGGACTCG CGACCGGTCT GTTCAAGCCC GCCGAGATCG CGCTCGACTC GACCGTGCAG
ATGGTCCGCA ACATCCCGGC GCTGGCGATG ATTCCGCTCG TGATTCTGTG GTTCGGCATC
GAGGAGCAGG CGAAGGTGTT TCTCGTCGCG CTGGGCGTGT TTTTCCCGAT CTACGTAAAC
ACCTTTCACG GCATCCGTTC GGTGGACGCC AATCTGATAG AGATGGCGCG CAGTTATGGC
GTGAAGGGCT TCGCGCTGTA CCGGCACGTG ATTCTGCCGG GCGCGTTGCC CTCCATTCTG
GTCGGCGTGC GCTTCGCGTT CGGGCTGATG TGGGTCACGC TGATCGTCGC CGAAACCATT
TCCGCGCAAT CGGGCATCGG CTACATGACC ATGAACGCCC GCGAATTCCT GCAAACCGAT
GTGGTGGTGG TCGGCATTCT GCTCTACGCG GCACTCGGCA AACTCGCCGA CGTGCTGGCG
AAAAGCCTCG AACGCGTCTC GCTGCGCTGG CATCCGGCAT ATCAACGAGG AGCGAAATCA
TGA
|
|---|
| Protein sequence | MAESTVSAAR HEGAEAGSGL NTLRRVGAHL APWLAPLAIL LAWEFAARSG VLSTRVLPEP
LAVVKAAWSL IQSGEMWTDV KVSTWRAVSG FAIGGGIGLV LGLATGLFKP AEIALDSTVQ
MVRNIPALAM IPLVILWFGI EEQAKVFLVA LGVFFPIYVN TFHGIRSVDA NLIEMARSYG
VKGFALYRHV ILPGALPSIL VGVRFAFGLM WVTLIVAETI SAQSGIGYMT MNAREFLQTD
VVVVGILLYA ALGKLADVLA KSLERVSLRW HPAYQRGAKS
|
|---|
| |