| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1728 |
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| Symbol | |
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| ID | 6281299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1956189 |
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| End bp | 1956848 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642621289 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001895360 |
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| Protein GI | 187923718 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCA CTTCCCTGCT CGTTGAATCG CTGCCCGTGC TCGCGCAGGG CGCCGTCCTG
ACGGTCAAGT TCGCGGTTCT GTCGATGATC TTCGGCCTGA TTGCCGGCGC CGTGCTCGCG
TTGATGGGCG TCAGCCACAA CCGCGTGCTG AACTGGATCG CGCGCATTTA TGTGAGCGTG
ATGCGCGGCA CGCCGCTGCT GGTGCAGATT TTCGTGATCT ATTACGGCTT GCCGAGTTTC
GGCATTTCAC TCGACCCGAC GCCGGCCGGC GTGATCGCGC TGTCCGCGAA TGTGGCCGCG
TATCTGTCGG AGAGCATGCG CGGCGCGATC CTGGGGATCC ACAATGGCCA ATGGCTCGCG
GCCTATAGTC TCGGACTCTC GCGACGCCAG ACGCTGCGCT ACGTGATCGC GCCGCAAGCC
TTGCGCATTG CCGTGCCGAG TATGTCGAAC AGTCTGATCA GCCTGATCAA GGACACTTCG
CTGGTGTCGG TAATCACCGT GACCGAATTG CTGCGCAGCG CGCAGGAGAT CATCGCATCG
ACCTATCAGC CGCTGCCGTT GTATCTTGCC GCGGCCGCCG TTTACTGGGT GCTGTGTCAG
GTGCTCGAAA GCGTGCAACG CTGGTACGAA CGGCGCCTTG CGCTGCCGTC GCGCCACTGA
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| Protein sequence | MSTTSLLVES LPVLAQGAVL TVKFAVLSMI FGLIAGAVLA LMGVSHNRVL NWIARIYVSV
MRGTPLLVQI FVIYYGLPSF GISLDPTPAG VIALSANVAA YLSESMRGAI LGIHNGQWLA
AYSLGLSRRQ TLRYVIAPQA LRIAVPSMSN SLISLIKDTS LVSVITVTEL LRSAQEIIAS
TYQPLPLYLA AAAVYWVLCQ VLESVQRWYE RRLALPSRH
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