| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1655 |
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| Symbol | |
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| ID | 6282749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1871531 |
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| End bp | 1872940 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642621216 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001895289 |
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| Protein GI | 187923647 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.591506 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAG AGATCGAATT TGCCGACGAC GCGCCTTCGT TCGCGCATAG CCAGCAGTTC
CAGGACATCA AGAACGCGGC GCACGAACAT CTGCTCACGC GCATCGAAGA ACTCGGCTCC
GAGTTCGGCC GCTGGTCGCG TAACGCGATC AACCAGTTCG TCGATCTGGA GATGGACAGC
TTCGTCAGGC TGCGCCGGAT ACCGATCAAC GAGAGCGAGG TGCGCCTGAT CGCCGAGGCG
CTGACCAAGG AACTCGCGGG CTTCGGTCCG ATCGAGGATC TGCTCGCCGA TCCGGCCGTC
GAAGACATTC TGATCAACGG CTACAACGAC GTGTACGTGT CGCGCCACGG CATTCTCACG
CGCATCCAGG TGCGCTTTGC CGATAACGCG CATCTGCTGC GGATCGTGCG GCGCATTCTT
GCGCCGATCG GCCGGCGCCT GGACGAATCG AATCCGATGG TGGATGCGCG TTTGCCGAAC
GGCGGCCGCG TGAACGTGGT AATCGAACCG CTCTCGATCG ACGGCCCGAT CGTCTCGATC
CGCAAGTTCC GCAAGGATCC GATGCGGCCC GACGATCTGC TCGGCAACGG CACTTATAGC
CCGGAAATCG GCGCGCTGCT CGAGGCCGCG GTGGCGGCGC GCTGCAATGT GCTGGTGTCG
GGCGGCACGA GTTCGGGCAA GACCTCGCTG CTCAACGCGC TGGCCTTTCA TATTCCCGAG
CCGGAACGGG TCGTGACGAT CGAGGACACC GCGGAACTGT CGCTGAACCA TCCGCACGTG
GTGCGGCTCG AAAGCCGCCC GGGCGGTTTC GACGGCTCGG GCATCGTGAC GATTCGCGAC
CTGCTGCGCA ATACGTTGCG GATGCGGCCG GACCGCATCA TCGTCGGCGA AGTGCGCGGT
GGCGAAGTGC TCGAAATGCT GCAGGCGATG AACACCGGCC ACGACGGCTC GATGGGCACC
GTGCACGCCA GCTCGCCGCG CGAATGCCTG TACCGGCTCG AAATGCTGGC TGGTTTCGCG
GGCTTCCAGG GCACCGAGTC GAGTCTGCGC CGCCAGATCG CCAACGCGAT CGACTTCATC
GTACAGATCG GGCGGCTTTC CAACGGGCGT CGGCGGATTC TGTCGATCAC GGAAGTCACG
GGGCTGTCGG ACAACATCAT CGCGACTCAG GAGCTGTATC GCTATGAGCC TATCCTGACG
GCCGAAGGCG ACGAGCTCGA CAACTGGGTT TCGCTGGGCA TTCATCCGCA CTCGCCGAAG
CTGGCGCGTT TCCGTCAGGC GCTGGGAGGC GGTGAAGCAG GCAATGCGTT CGGCAACGCG
GGCTTCGGCG GATCGGGCGG CGGCGGTTTC GGTGGCGGCA GTGGTGGCTT CGGCGGTGGC
GGCGGCTTCG GCGGAGGCTT CAATGTCTAG
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| Protein sequence | MAKEIEFADD APSFAHSQQF QDIKNAAHEH LLTRIEELGS EFGRWSRNAI NQFVDLEMDS
FVRLRRIPIN ESEVRLIAEA LTKELAGFGP IEDLLADPAV EDILINGYND VYVSRHGILT
RIQVRFADNA HLLRIVRRIL APIGRRLDES NPMVDARLPN GGRVNVVIEP LSIDGPIVSI
RKFRKDPMRP DDLLGNGTYS PEIGALLEAA VAARCNVLVS GGTSSGKTSL LNALAFHIPE
PERVVTIEDT AELSLNHPHV VRLESRPGGF DGSGIVTIRD LLRNTLRMRP DRIIVGEVRG
GEVLEMLQAM NTGHDGSMGT VHASSPRECL YRLEMLAGFA GFQGTESSLR RQIANAIDFI
VQIGRLSNGR RRILSITEVT GLSDNIIATQ ELYRYEPILT AEGDELDNWV SLGIHPHSPK
LARFRQALGG GEAGNAFGNA GFGGSGGGGF GGGSGGFGGG GGFGGGFNV
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