Gene Bphyt_1617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1617 
Symbol 
ID6281874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1824575 
End bp1824979 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content65% 
IMG OID642621178 
Productpeptidyl-tRNA hydrolase domain protein 
Protein accessionYP_001895251 
Protein GI187923609 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.599417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCCC GCTATCCCAT CCCGCCGAAC GAAATCGAAC TGACCGCAGT GCGCGCGCAA 
GGAGCGGGCG GCCAGAACGT CAACAAGGTG TCGAGCGCCA TTCATCTGCG CTTCGACGTG
CAGGCATCTT CGTTGCCAGA AGTGTTGAAG ATGCGCCTGC TCGCGCTATC CGATCACCGG
CTCACGCGCG ACGGCGTGGT GATCATCAAG GCGCAGGAGC ATCGGACTCA GGAGATGAAC
CGGGCGGCGG CGCTGGCGCG GCTCGATGAA CTGATCGAAA GCGTCAGCGT GACGCGCAAG
CCGCGCGTCG CAACCCGGCC GACGCGCGCG TCGAACCTGC GGCGCCTCGA CGGCAAAGCC
AAGCGCAGTG AGATCAAATC CGGCCGCGGC CGGGTGGACG ATTAA
 
Protein sequence
MTSRYPIPPN EIELTAVRAQ GAGGQNVNKV SSAIHLRFDV QASSLPEVLK MRLLALSDHR 
LTRDGVVIIK AQEHRTQEMN RAAALARLDE LIESVSVTRK PRVATRPTRA SNLRRLDGKA
KRSEIKSGRG RVDD