| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1595 |
|---|
| Symbol | |
|---|
| ID | 6284358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 1793402 |
|---|
| End bp | 1795393 |
|---|
| Gene Length | 1992 bp |
|---|
| Protein Length | 663 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642621156 |
|---|
| Product | coenzyme A transferase |
|---|
| Protein accession | YP_001895229 |
|---|
| Protein GI | 187923587 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0936861 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAG GCTTTCAACA CCCGTTCCTC GCCACCGCAA ACAACATTGG GCGAGGCAAA
ATCGTCAGCG CCCAGCAAGC GGTCAGACTG ATCCGTCCGG GTAACACGGT GGCCACGGGT
GGCTTCGTCG GCATTGGCTT TGCGGAAGAA ATCGCCGTCG CACTGGAACA ACTGTTCCTC
GACTCGGCCC CTGACGATAG CGACGCCCCG CGCAATCTGA CGCTGGTCTA CGCGGGCGGT
CAGGGCGACG GCGCTCGCAA GGGCCTGAAT CACTTTGCCC ATCAAGGTCT GGTTCGACGG
GTTATCGGTG GTCATTGGGG GCTCGTGCCG GGGCTTCAAC GCCTGGCCGT CGAAGGCCAT
ATCGAAGCGT ATAACCTGCC TCAAGGCGTC ATTTCCCAGC TGTTTCGCGA TATCGCGGCG
CATCGGCCCG GTCATTTGTC CACGGTCGGA CTCGATACCT TCGTCGACCC GCGCAACGGC
GGCGGCAAGC TCAACGCCCG CACCACGGAG GACCTCGTTA GCCTGATATC GGTCAACGGC
GCCGACTGCC TCCTGTACAA GACATTTCCG GTCGACGTCG CCATCGTGCG GGGCACCACT
GCCGATGCAA ACGGCAATGT GACGATGGAA AAGGAAGCGC TGACTCTTGA GTCCCTTGCC
ATCGCAATGG CCGCGCGCAA CTCCGGCGGC ATCGTGATCG TTCAGGTCGA GCGCATTGCC
GAAGCGGGGA CCCTGAATCC GCGACAGGTC AAAATACCCG GGATTCTGGT CGACTGCGTT
GTCGTCGCGA AACAGGAAAA CCACTGGCAA ACCTTCGCTG AGTCGTACAG CCCCGGTTTT
GCGAGCGAGC TTCGCATTGC GACGAGTTCG ATTCCGGGCA TGGCACTGAC AGAGCGGAAA
GTCATCGCAC GGCGCGCTTC GTTCGAGCTG ATGGCCAATA GCGTCGTCAA TCTTGGAATC
GGCATGCCGG AAGGGATTGC CAGCGTCGCG AACGAAGAGA AGGTGTGCGA CCTTTTCACG
ATGACAACCG AGCCGGGCGT CATTGGCGGT ATTCCGGCCG GGGGTTTGAA TTTCGGCGCG
GCAACCAATA CCGACGCCAT CATCGACCAG CCCTACCAGT TCGACTTCTA CGACGGCGGC
GGCCTTGACA TTGCATTTCT CGGGCTCGCG CAAGTGGACC GGGAAGGCAA CCTCAACGTC
AGCAAGTTCG GGCCCAAGCT CGCGGGCGCG GGTGGCTTCA TCAACATCTC GCAGGCGGCG
AAGAAAGTGG TGTTTGTCGG AACCTTCAAC GCCGGCAAGC TAGACGTCAA TATCAAGGAC
GGGCGCCTGC AGATTCTGCA GGATGGCGTC TGCCAGAAGT TCGTCGAGGC GGTGGAACAC
CGAACCTTCG GCGGCCGTTA CGCCAGCGAA CGGCAGCAGC CCGTGCTCTA CATTACCGAG
CGATGCGTCT TTACCCTCAC GCCCGACGGA CTCGAACTCG TCGAGATTGC ACCGGGGGTC
GATCTTCAGC GAGACATTCT TTCGCAGATG GGCTTTGCGC CCGTCATCAA ATCGCCGCCG
CGGCTGATGG ACGCTCGTAT TTTCGACAAC AAGCCGATGG GTTTGCGAGC CATGCTGTTG
AGGCTGACGC TCAGCGAGCG GTTCAGCTAC GACGCCGACA AAAATATGTT GTTCATCAAT
TTCGAAGGCC ACAAGGTCAT GACTGTCGAC GACGTTGAAG CAGTCAGAGC CGAGGTCGAG
CGGGTCCTGT CCGGCCTCGA TGTGCGGCCC CACGCAATCG TCAACTACGA CAATTTCTCG
ATCGCGCCCG AAGTCATCGA TGCTTATTCT GAAATGGTGA ATGGCCTCGT CGCCCGATAT
TATTCCGACG TCACGCGTTA CACGACAAGC AGCTTCCTGC GCATGAAACT GGGGGACGCG
CTGCAGCGGC GCAGTGTCGC TACGTATATT TATGAGAGCC CCGAGGAGGC ATCGTCACAC
GAGGCGCGTT AG
|
|---|
| Protein sequence | MSAGFQHPFL ATANNIGRGK IVSAQQAVRL IRPGNTVATG GFVGIGFAEE IAVALEQLFL
DSAPDDSDAP RNLTLVYAGG QGDGARKGLN HFAHQGLVRR VIGGHWGLVP GLQRLAVEGH
IEAYNLPQGV ISQLFRDIAA HRPGHLSTVG LDTFVDPRNG GGKLNARTTE DLVSLISVNG
ADCLLYKTFP VDVAIVRGTT ADANGNVTME KEALTLESLA IAMAARNSGG IVIVQVERIA
EAGTLNPRQV KIPGILVDCV VVAKQENHWQ TFAESYSPGF ASELRIATSS IPGMALTERK
VIARRASFEL MANSVVNLGI GMPEGIASVA NEEKVCDLFT MTTEPGVIGG IPAGGLNFGA
ATNTDAIIDQ PYQFDFYDGG GLDIAFLGLA QVDREGNLNV SKFGPKLAGA GGFINISQAA
KKVVFVGTFN AGKLDVNIKD GRLQILQDGV CQKFVEAVEH RTFGGRYASE RQQPVLYITE
RCVFTLTPDG LELVEIAPGV DLQRDILSQM GFAPVIKSPP RLMDARIFDN KPMGLRAMLL
RLTLSERFSY DADKNMLFIN FEGHKVMTVD DVEAVRAEVE RVLSGLDVRP HAIVNYDNFS
IAPEVIDAYS EMVNGLVARY YSDVTRYTTS SFLRMKLGDA LQRRSVATYI YESPEEASSH
EAR
|
|---|
| |