Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1577 |
Symbol | |
ID | 6281639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 1777651 |
End bp | 1778955 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642621141 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_001895214 |
Protein GI | 187923572 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.321925 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGAAGC GGCACCGCGG CCGTAATATC GCGTTGATCA TCGCCGCACT GGTCATCCTC GGCGTGGTGC TGTGGCGCTG GCATCCATGG GGCGGTCCCG GCGGCGGCGC GAGCGGCGCG GCCGGCGCCA GCGATGCGAG CGGCGCCCGC GCCGGGCGCG CTGGCCGAGG TGGCGCGATG GGCAATATGC CGCAGCCGGT TCACGTGGCT GCCGCGACGC AGGGCGAGAT GCCGGTGGTG CTAACCGCCC TCGGCACGGT CACGCCGCTG GCCAACGTCA CCGTGCTGCC GCAGTTGAGC GGCGTGTTGC AGGAGGTGTA TTTCAAGGAA GGCCAGATGG TCAAGAAGGG CGACGTGCTG GCCCAGATCG ACCCGCGCCC GTATCAGATC TCGCTCGACA ACGCGCAAGG CACGCTCGCC CGCGACGAGG CCCTGCTGCA AACCGCCCGC CTCGACCTGA AGCGCTACCA GACGCTGCTC TCGCAAGACT CCATCGCCAG CCAGCAGGTG GATACGCAGG CCTCGCTGGT GCGTCAATAC GAAGGCACGG TGAAGTCCGA CAAGGCCAAC GTCGACACCT ACAAGCTCGA CCTCGTCTAC GCGCGCATTA CGGCCCCAGT GTCGGGGCGC GTCGGTTTGC GCCAGGTCGA CCCGGGCAAC TACGTGACGC CGAGCCTCAC TAACGGCATC GTGGTGATTA CGCAATTGCA GCCGATTAGC GTGATCTTCA CGACCTCTGA GGACAACCTG CAACAGATCA TCCAGCAGAC CCAGTCGGGC GCGAAGCTCT CGGTCACGGC GTATGACCGC AGCAATACCA CGTCGCTCGA AGGCGGCATG CTCGAAACGC TGGACAACCA GATCGACACC ACCACCGGCA CGGTCAAGCT GCGCGCGATC TTCCAGAACA GCAAGAACCT GCTGTTCCCC AATCAGTTCG TGAATACGCG CCTGCTGGTC GATACGATCA AGGACGCCGT GATCGTGCCG ACGCCGGCCG TGCTGAACGG CTCGATGGGA CAGTTCGTGT ACGTCGTGAA GGCGGATAAC ACGGTGACCG TGCGACCGGT CAAGATCGGC CCCGTGGATG GCGAACGCAC CAGCATCAAG TCCGGCCTGG CGGTGGGCGA GCGCGTCGTG ATCGACGGTT CGGACCGCCT GAAGGAAGGC GCGAAAATCA CGATTCCGGC CGACAAGCCG CGCGGCGCAT CGGGTGCCCG TGGGGCAAGC GGCGCGGCCG CTTCATCGGG CGCATCTGGC GCCCACGCGC ATCATGGCAA ACACGCGGCG CAAGCCTCGC AATAA
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Protein sequence | MVKRHRGRNI ALIIAALVIL GVVLWRWHPW GGPGGGASGA AGASDASGAR AGRAGRGGAM GNMPQPVHVA AATQGEMPVV LTALGTVTPL ANVTVLPQLS GVLQEVYFKE GQMVKKGDVL AQIDPRPYQI SLDNAQGTLA RDEALLQTAR LDLKRYQTLL SQDSIASQQV DTQASLVRQY EGTVKSDKAN VDTYKLDLVY ARITAPVSGR VGLRQVDPGN YVTPSLTNGI VVITQLQPIS VIFTTSEDNL QQIIQQTQSG AKLSVTAYDR SNTTSLEGGM LETLDNQIDT TTGTVKLRAI FQNSKNLLFP NQFVNTRLLV DTIKDAVIVP TPAVLNGSMG QFVYVVKADN TVTVRPVKIG PVDGERTSIK SGLAVGERVV IDGSDRLKEG AKITIPADKP RGASGARGAS GAAASSGASG AHAHHGKHAA QASQ
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