Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1558 |
Symbol | argD |
ID | 6281074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1750448 |
End bp | 1751683 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642621122 |
Product | bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein |
Protein accession | YP_001895195 |
Protein GI | 187923553 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases [TIGR03246] succinylornithine transaminase family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.751074 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACC TGACAGTGAC ACGCCAGACC TTCGACGAAG TCATGGTGCC GGTGTTTTCG CCCGCCGCCT TCGTACCGGA TCGCGGTCTC GGCTCACGCG TCTGGGATAC GCAAGGCCGC GACTATATCG ACTTCGCCGG CGGCATCGCC GTCACCGCTC TGGGCCATGC ACATCCTGAG TTGCTGAACG TGCTGCACGA ACAGGGCGGC AAGTTGTGGC ATATCGGCAA TGGTTACACC AACGAGCCGG TGTTGCGCCT CGCCAAACGC CTCGAAGACC TGACGTTCGC CGACCGCGCG TTCTTCGCCA ACTCGGGCGC GGAAGCGAAC GAGGCCGCGT TGAAGCTGGC GCGCCGCGTC GCGTTCGACC GCCACGGCGC GGATAAATAC GAAATCATCT CGTTCACGCA GTCGTTCCAT GGCCGCACGT TCTTCACGGT CAGCGTAGGC GGCCAGCCGA AGTACTCGGA AGGCTTCGGC CCGGTGCCTG CCGGCATCAC ACATCTGCCG TACAACGACA TCGAAGCCGT GAAGAAAGCC ATCGGCGCGC AAACCTGCGC GGTGATCGTC GAGCCGATTC AGGGCGAAGG CGGCGTGATC CCGGCTGATC CGGCGTTCCT GAAGGCGTTG CGCGAAGCCT GCGATCAGCA CGGCGCACTG CTGATTTTTG ACGAGGTACA AACGGGTGTG GGCCGCAGCG GCTATTTCTA CGCGTACCAG GAAACGGGCG TGACGCCGGA CATTCTCACC ACGGCGAAAG CGCTCGGCAA CGGTTTCCCG ATCGGCGCGA TGCTGACCAC CAACGAACTG GCCGCGTATT TCAAGGTCGG CGTGCATGGC ACAACATACG GCGGCAATCC GTTGGGCGCG GCGATCGCTG AGAAGGTGGT CGAGTTGGTC AGCGATCCGA AGCTGCTCGA AGGCGTGCGC TCGCGCAGTG AAGCGCTGAA AGGCCACCTC GCGAAGCTGA ACGAACGCTT CGGCCTGTTC ACGGAAGTGC GCGGCCGGGG TCTTCTGATC GGCGCGGAAT TGAACGAGGC GTTCAAGGGC CGCGCGAAAG ATTTCGTCAC GGCAGCAGGC CAGCACGGCG TGATCATGCT GATGGCCGGT CCCGACGTGC TGCGTTTCGT GCCGTCGCTG ATCATGCCGC TCGACGACAT GAACGAAGGC TTCGAGCGAC TCGCCAAGGC CATCGAAAGC ATTGTCGGCG CGAAGGCCGA AGCCGCGTCG AACTGA
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Protein sequence | MNDLTVTRQT FDEVMVPVFS PAAFVPDRGL GSRVWDTQGR DYIDFAGGIA VTALGHAHPE LLNVLHEQGG KLWHIGNGYT NEPVLRLAKR LEDLTFADRA FFANSGAEAN EAALKLARRV AFDRHGADKY EIISFTQSFH GRTFFTVSVG GQPKYSEGFG PVPAGITHLP YNDIEAVKKA IGAQTCAVIV EPIQGEGGVI PADPAFLKAL REACDQHGAL LIFDEVQTGV GRSGYFYAYQ ETGVTPDILT TAKALGNGFP IGAMLTTNEL AAYFKVGVHG TTYGGNPLGA AIAEKVVELV SDPKLLEGVR SRSEALKGHL AKLNERFGLF TEVRGRGLLI GAELNEAFKG RAKDFVTAAG QHGVIMLMAG PDVLRFVPSL IMPLDDMNEG FERLAKAIES IVGAKAEAAS N
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