Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1556 |
Symbol | |
ID | 6281072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1748440 |
End bp | 1749231 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642621120 |
Product | ABC transporter related |
Protein accession | YP_001895193 |
Protein GI | 187923551 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4598] ABC-type histidine transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.648429 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTCCACA CGACTCAAAC CGAAGCTTGC AAGCTCGCCG TACAGGACAT CCACAAGCGC TACGGCGACA ACGAAGTGCT CAAGGGCGTG TCGCTCAATG CGAACAAGGG CGACGTGATC AGCATCATCG GCGCGAGCGG GTCGGGCAAG AGCACCTTCC TGCGCTGCAT CAATTTCCTC GAGCGGCCGA ACGCCGGGCA GATCGTCGTC GACGGCGAGA TGGTGAAGAC GAAAACCGAT CGCGCCGGCA ATCTCGAAGT CGCCGATCAC AAGCAGTTGC AGCGAATCCG CACGAAGCTC GCCATGGTGT TCCAGCACTT CAACTTGTGG GCGCACATGA ATGTGCTCGA GAACATCGTC GAGGCGCCGA TTCACGTGCT GGGTCTGAAG CGCAAGGAAG CCGAAGACCG CGCGCGCGAA TATCTGGAGA AGGTCGGTCT CGCGCCGCGC CTCGAAAAGC AGTATCCGTC GCATCTGTCG GGCGGGCAGC AGCAGCGTGT GGCGATTGCC CGCGCGCTGG CCATGAACCC CGACGTGATG CTGTTCGACG AGCCGACTTC CGCGCTCGAT CCCGAACTGG TCGGTGAAGT GCTGAAGGTC ATGCAGAAGC TCGCCGAAGA AGGCCGCACG ATGATCGTCG TTACGCACGA AATGGGTTTC GCGCGCAACG TGTCGAACCA TGTGATGTTC CTGCATCAAG GCCGCACCGA AGAAGAAGGC CTGCCCGCTG AAGTGCTCAG CGCGCCGCGT AGCGAACGGC TCAAGCAGTT CCTGTCCGGC AGCCTGAAGT AA
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Protein sequence | MLHTTQTEAC KLAVQDIHKR YGDNEVLKGV SLNANKGDVI SIIGASGSGK STFLRCINFL ERPNAGQIVV DGEMVKTKTD RAGNLEVADH KQLQRIRTKL AMVFQHFNLW AHMNVLENIV EAPIHVLGLK RKEAEDRARE YLEKVGLAPR LEKQYPSHLS GGQQQRVAIA RALAMNPDVM LFDEPTSALD PELVGEVLKV MQKLAEEGRT MIVVTHEMGF ARNVSNHVMF LHQGRTEEEG LPAEVLSAPR SERLKQFLSG SLK
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