| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1555 |
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| Symbol | |
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| ID | 6281071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1747645 |
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| End bp | 1748358 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642621119 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001895192 |
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| Protein GI | 187923550 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.413739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACA TCCTCAATCA ATTCTGGCGC GCGTTCCTGT ACTGGGACGG CCAGCGCATG
TCCGGACTCG CGGTCACGCT GTGGCTGCTG GTGGCATCGG TCGGGATCGG TTTTTGTGCG
GCGATTCCGC TGGCGGTGGC GCGCGTGTCG AAGAAGCGCT GGCTCTCCAC GCCGGTGCGT
CTTTACACTT ACGTGTTTCG CGGCACGCCG CTGTACGTGC AATTGCTGCT GATCTATACC
GGCATGTACA GCCTCGAATT CGTGCGCTCG CATCAACTGC TGGACGCATT TTTCCGCAGC
GGTTTTCACT GCGCGATTCT CGCCTTCGCA CTGAACACCT GCGCGTACAC CACGGAGATT
TTCGCCGGCG CGATCCGCTC GACCTCGCAC GGCGAAGTGG AAGCGGCGCG CGCCTACGGC
ATGAGCTGGT TCACGATGTA CCGGCGCATT GTGATACCGT CCGCGCTGCG CCGGGCCTTG
CCGTTGTACA GTAACGAAGT GATCCTGATG TTGCACGCCA CCACGGTCGC CTTTACGGCC
ACGGTGCCGG ACATCCTGAA GGTGGCGCGC GACGCGAACT CGGCCACTTA CCAATCGTTC
GATGCGTTCG GCCTCGCGGC GCTGATTTAC CTCGTGGTGT CGTTCGTGCT GGTGGCTTTG
TTCCGTCGCG CCGAGCGTCA TTGGCTGGGT TACCTGGCGG TGCGCACGCA TTGA
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| Protein sequence | MIDILNQFWR AFLYWDGQRM SGLAVTLWLL VASVGIGFCA AIPLAVARVS KKRWLSTPVR
LYTYVFRGTP LYVQLLLIYT GMYSLEFVRS HQLLDAFFRS GFHCAILAFA LNTCAYTTEI
FAGAIRSTSH GEVEAARAYG MSWFTMYRRI VIPSALRRAL PLYSNEVILM LHATTVAFTA
TVPDILKVAR DANSATYQSF DAFGLAALIY LVVSFVLVAL FRRAERHWLG YLAVRTH
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