| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1539 |
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| Symbol | |
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| ID | 6282246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1728973 |
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| End bp | 1730124 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642621103 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_001895176 |
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| Protein GI | 187923534 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTTC GCTACACGCT GAAACCGCTT GCCCTGTTCG TTGGCGCTAT CTTCGCCATC
GCGCCGCCGG CCAGCTTCGC CGACGACCTG CCGGTGAAGA TCGGCTTCGC TGCCCCGCTG
ACCGGCGCCA ACGCCGGCTA CGGCAAAGAT CTGGAGAACG GCGTCCGGCT CGCGCTGGAA
GAAGCCAACG CGCAAAAGAT CAAGATCGGC GATAAGGTGG CCCAATTCCA GATCGTCTCC
GAAGACGATC AGGCCGACCC GCGCATCGGC GTGCAAGCCG CGCAGAAGCT GGTCGACGCG
GGCGTGTCGG CCGTGGTGGG CCACTTCAAC TCGGGCACGA CGATCCCCGC CTCGCAGGTC
TACGAGCAGG CCGGCATTCC GGTGATCGAC CCGGCCGCCA CCAATCCGAT CATCACCGGA
CGCGGCTTCG CGAACACCTT CATGGTGATT TCCACCGACG CGCAGAACGC CGGCAATGCA
GGCGTCTATG CCGTGGAAGT GACCAAGGCC AAGCGCATCG CGATCATCGA CGACCGCACC
GCGTTCGGCC AGGGCGAGGC GGACGAGTTC GAGAAAGCGG TGAAAGCGCA CGGCGGCAAC
CTCGTGGCGC GTGAGTACAC CGACAACAAA GCGGTCGACT TCAGCACGCA GATCACCAAG
ATCAAATCGA CCAACGCCGA TCTGATCTTC TTCGGCGGAC TGGACACGCA GGCGGCGGGC
TTTGCCAAGC GCATGAAGCA GCTGGGCATG AACGCGCAAC TGGTGGGCGG CGGCGGCGTG
ATGGATCAGG ACTTCATCAA GCTTGCGGGC GATTCCGCCG AAGGCGTGAT GGCCTGGGAA
TATGGACGGC CACTCGCGCA GTTGCCGGGC GGCAAGGATT TCTCCGCGAA GTTCAAGAAG
CGCTTCGGGG TGGATATCCT GTCGTACGCG CCGTTCGGTT ATGACGGCGC CTGGGCTGCG
ATCAAGGCCA TGCAAAAGGC CAAGTCCAGC TCGCCGAACG ACTACCGGTC GGCGCTCAAG
GCGATTGATT TCGAAGGCGT GACCGGCAAG ATTTCCTTCG ACAACAACGG CGCGTTGAAG
AGCGGCGCAT CGACGCTTTA TCAGGTCAAG AATGGCGCGT GGGTGCCCAT CGTGACCAAG
AGCGGGAGTT AA
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| Protein sequence | MSLRYTLKPL ALFVGAIFAI APPASFADDL PVKIGFAAPL TGANAGYGKD LENGVRLALE
EANAQKIKIG DKVAQFQIVS EDDQADPRIG VQAAQKLVDA GVSAVVGHFN SGTTIPASQV
YEQAGIPVID PAATNPIITG RGFANTFMVI STDAQNAGNA GVYAVEVTKA KRIAIIDDRT
AFGQGEADEF EKAVKAHGGN LVAREYTDNK AVDFSTQITK IKSTNADLIF FGGLDTQAAG
FAKRMKQLGM NAQLVGGGGV MDQDFIKLAG DSAEGVMAWE YGRPLAQLPG GKDFSAKFKK
RFGVDILSYA PFGYDGAWAA IKAMQKAKSS SPNDYRSALK AIDFEGVTGK ISFDNNGALK
SGASTLYQVK NGAWVPIVTK SGS
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