| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1451 |
|---|
| Symbol | |
|---|
| ID | 6281705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 1627631 |
|---|
| End bp | 1629298 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642621017 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001895090 |
|---|
| Protein GI | 187923448 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
|---|
| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCTA CTCAGGCACC GATTGCCCGG CCGTTGCTGG AAATCGACCG TTTCTCCGTG
CGTTTCGGCG CCAAGGTCGC CGTGCACGAA CTCAGCCTTT CCATCGCACG CGGCGAGCGC
GTGGCACTGG TCGGCGAATC GGGTTCGGGC AAGAGCGTCA CCGCGCTGTC CATTCTGCGG
CTTGTCGAGC ATGCCGAATT GAGCGGCCGC ATGTTGCTCG ATGGTGAAGA TCTGCTGCAG
AAAACCGAGC AGCAGATGCG TGGCCTGCGT GGCGCCGACG TCGCGATGGT GTTCCAGGAA
CCGATGACGG CGCTCAATCC GCTCTTCACG ATCGGCAAGC AGATTGCCGA GAGCCTGCGT
CTGCACGAAG GCTTGCGGCC GAACGCGGCG CGCGAGCGCG GTATCGAGTT GCTCAGACGC
ACCGGCATTC CCGAGCCGGA ACGGCGCATC GACAGTTTTC CGCATCAATT GTCCGGCGGC
CAGCGGCAGC GTGCGATGAT TGCCATGGCG CTTGCATGCC GTCCGCGATT GCTGCTCGCG
GATGAGCCGA CCACAGCGCT CGACGTGACC GTGCGCCAGC AGATCGTCGA CCTGTTGATT
TCGCTGCAGG AACAGGAAGC GGCCGCACGC GGCATGGCCG TGCTGTTGAT CACGCACGAT
CTGAATCTGG TGAAGCGTTT TGCGCAGCGC GTCGCGGTGA TGGAGAAGGG CGTGCTGGTC
GAAACCAATA CGACCGAGGC GCTGTTCGCG AGTCCGCAGC ATCCGTACAC GCGGCGGCTG
CTCGACAGCG ATCCGCAACG CGCGCTCGAG CCGGTCGAGG ACGGCGCGCG CCGGTTGCTC
GAAGTACAAG GATTGGCCGT CGATTACCGC ACGTCGGCGA AAGGCTGGCG GTCCATGTTT
GGGCGCTCCA CGTTTCGCGC GGTGCATGAC GTCGACCTGA GCGTGCGGCG CGGCGAAACG
CTCGGCATTG TCGGTGAATC GGGTTCGGGG AAATCGACCT TGGCGGCCAC CGTGCTCGGC
TTGCAACAAC CGGCCGCGGG ACATATCCAT ATCGACGGCC TGCCGCTTTC CACGCTCAAG
ACGGCGAGTT CGCGCCGCGA GCTGTATTCG CGCATGCAAG TCGTGTTTCA GGACCCGTTC
GGCTCGTTGT CGCCACGCAT GACGGTCGAG CAGATCATCG GCGAGGGGTT GGCCGTGCAT
CGGCCGGAAG TGGATGCGAA GGCACGGCGC GCGCGTGTCG GCAGCCTGCT CGAAGAGGTC
GGCATGCCCG CTGACGCGAT GCTGCGCTAT CCGCATGAGT TCTCCGGCGG CCAGCGTCAA
CGTATTGCGA TTGCGCGCGC ATTGGCCGTC CAGCCGGAAC TGATCGTGCT CGATGAGCCG
ACCAGCGCGC TCGACGTGTC GATCCAGAAA CAGGTGCTGA ATCTGCTGAC AAATCTGCAG
AAAAAGTACA AGCTAAGCTA TTTGTTCATT ACGCACGATC TGGCGGTGAT GCGAGCCATG
GCGCATCGCG TGATCGTGAT GAAGTCGGGA CGCATCGTCG AAGCCGGTGA CACACTCGAT
GTGCTGCATG CGCCGACGCA TCCTTATACC CAATCGCTGC TGGCCTCGTC GCTCAACGTG
CCGGAGCCGG GCGCCGGCAC GATTCATACG GGACACGCCA ATGATTGA
|
|---|
| Protein sequence | MTATQAPIAR PLLEIDRFSV RFGAKVAVHE LSLSIARGER VALVGESGSG KSVTALSILR
LVEHAELSGR MLLDGEDLLQ KTEQQMRGLR GADVAMVFQE PMTALNPLFT IGKQIAESLR
LHEGLRPNAA RERGIELLRR TGIPEPERRI DSFPHQLSGG QRQRAMIAMA LACRPRLLLA
DEPTTALDVT VRQQIVDLLI SLQEQEAAAR GMAVLLITHD LNLVKRFAQR VAVMEKGVLV
ETNTTEALFA SPQHPYTRRL LDSDPQRALE PVEDGARRLL EVQGLAVDYR TSAKGWRSMF
GRSTFRAVHD VDLSVRRGET LGIVGESGSG KSTLAATVLG LQQPAAGHIH IDGLPLSTLK
TASSRRELYS RMQVVFQDPF GSLSPRMTVE QIIGEGLAVH RPEVDAKARR ARVGSLLEEV
GMPADAMLRY PHEFSGGQRQ RIAIARALAV QPELIVLDEP TSALDVSIQK QVLNLLTNLQ
KKYKLSYLFI THDLAVMRAM AHRVIVMKSG RIVEAGDTLD VLHAPTHPYT QSLLASSLNV
PEPGAGTIHT GHAND
|
|---|
| |