| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1409 |
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| Symbol | |
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| ID | 6282716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1575179 |
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| End bp | 1575913 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642620974 |
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| Product | TonB family protein |
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| Protein accession | YP_001895048 |
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| Protein GI | 187923406 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.103412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGGCCT CGCCTACCGT ATCAGCCGGC GCCGTGCCGG CTTCGTCGAC CCGATCGAAC
TCCCGCGTCC TGACCGCGAC CGCCGTGGTT GCAGCGATTC ACGTCGCGCT GCTTGCCGTG
GTGATGACCT TGCGTCACGA TCCCGTGCAG CCCGTTCTGG AATCGCGCGT CATGACCGCG
CAGTTGCTGC CGCCGGCGCC GGTTGCCGCG CCGGTCGCGA TTCAATCGAT CGCGCCGCCG
CCCACGCCGA CACCGCCGGT TCGTACCAAA CCGAAGGTCC AGCCGAAACC GACTCCGACA
CCCAAGCCGA CGCCTACGCC CCTACCGGTG GCCGCCGCGC CGTCGCCGAC GCCCGTCGCC
GCACCCGATC CGACGCCGCC CGCGCCTGCC GCACCGGTTG CGCCGCCTGC CCCCGCTGCA
CCGGCAATCG GCCGTCAGAC GATGGAGATC AGCGCGCCCA AAGACATGTC GCACCTCTCG
TGCAATGTGG GCCAACCTGA CTATCCGCCT CTCTCCAGGC GCCGCGGCGA GACTGGCACG
GTGATCGTGA GCCTCGTGGT CGGCGTGACC GGCAAGATCG AAAACGTCGC GCTGAAAAAG
AGCAGCGGCT TCAGCCGCCT CGACGACGCC GCGCTTGACG CAGTGCGCTC GAGCGCCTGC
CAACCTTATC TTGAGAACGG GCAGCCGGTA CGGGTCCCGA CCAGCCAGCG TTTCAACTTC
AGTCTGAACG ATTGA
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| Protein sequence | MPASPTVSAG AVPASSTRSN SRVLTATAVV AAIHVALLAV VMTLRHDPVQ PVLESRVMTA
QLLPPAPVAA PVAIQSIAPP PTPTPPVRTK PKVQPKPTPT PKPTPTPLPV AAAPSPTPVA
APDPTPPAPA APVAPPAPAA PAIGRQTMEI SAPKDMSHLS CNVGQPDYPP LSRRRGETGT
VIVSLVVGVT GKIENVALKK SSGFSRLDDA ALDAVRSSAC QPYLENGQPV RVPTSQRFNF
SLND
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