Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1394 |
Symbol | |
ID | 6284399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1560935 |
End bp | 1562173 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642620959 |
Product | Patatin |
Protein accession | YP_001895033 |
Protein GI | 187923391 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.127085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00234319 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGCAAC GCAATCTCAA GCGGGCGCGC GTCGGCGCGC CCGGCGACGG GGAAGGCGAG GGCGCCGGTC CGGCGCCCGC CACGCATCCC GGCCGGCACC TCCATTTGCC CAAGTACGAA ACCGTCGCCT TGATGCTGCA AGGCGGTGGC GCCCTGGGCG CTTATCAGGC CGGTGTCTTT CAGGGACTTT ACGAGGCCGG CATCGAACCG AACTGGCTGG CCGGCATTTC GATCGGCGCG TTGAATACGG CAATCATCGC CGGCAATCCG CCTGAAAAGC GCGTTGAACG GCTGCTGCAA TTCTGGGAGA CGATCTGCCA GCCGGCCTTC GGGCCGCCGC TGCCTGCGTT CATCGAGCAC GCTCTCTTCA ATTCCAGCGA CGCAATACGC AAGGCCTTCA CGGCAACGCA GGCCGTGGGC GCCATCGTCG AGGGGCAGAA GGGCTTTTTT GTGCCGCGCT TCCCGCCGCC GTTGCCCACG GTGTCCGGGC CGCCGCAATT GGCCAGCTAT TACGACACCA CGCCGTTGAA GGCCACGCTC GAAGCGTTCT GCGATTTCGA CCGGATCAAT TCGAAAGAAA TGCGCGTCTC GGTCGGGGCG GTCAATTGCG GTACGGGAAA TTTCGCGTAC TTCGATAACA CGCATACAAC GCTCAGGCCC GAGCATTTCA TGGCGTCAGG CGCGTTGCCG CCCGGTTTCG CGGCGGTCGA GATCGATGGT CAGTACTACT GGGACGGCGG CTTGATGTCG AACACGCCGC TCTATGAGGT GATCCAGTCC ACGCCGCGTC GCGACACGCT CGCCTTCCAG GTCGATCTCT GGAGCGCGAT CGGACCGGTG CCGGACAACA TCACCGACGT GCAAGGGCGC ATGAAAGACA TCCAGTATTC GAGCCGCACC CGTCTCGTGA CCGATATGCT GCAGCGGTCG CAGCGTTTCC GGCATGTGTT GCGCGAGGTG CTGGATCGCG TGCCGTCCGA TCAGCGTGAC GACCCGTGGT GCAAGCTGGC CGAGGATCTC TCGTGTTCGA AGCGCTACAA CGTGGTCCAT CTGATCTACC GCCACAAGGA ATACGAAGGT CACTACAAGG ACTTTCAATT CGGCCTGTCG ACGATGCGGG AACATTGGCA AAGCGGTTTG GAGGACATCC GCCATTCGCT CGCGCAACCC GATTGGCTCG ACATGCCGGA TAACGACGCG GGCTTTGTCA CGCACGATAT CCATCGGGAT GCGCGCTGA
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Protein sequence | MAQRNLKRAR VGAPGDGEGE GAGPAPATHP GRHLHLPKYE TVALMLQGGG ALGAYQAGVF QGLYEAGIEP NWLAGISIGA LNTAIIAGNP PEKRVERLLQ FWETICQPAF GPPLPAFIEH ALFNSSDAIR KAFTATQAVG AIVEGQKGFF VPRFPPPLPT VSGPPQLASY YDTTPLKATL EAFCDFDRIN SKEMRVSVGA VNCGTGNFAY FDNTHTTLRP EHFMASGALP PGFAAVEIDG QYYWDGGLMS NTPLYEVIQS TPRRDTLAFQ VDLWSAIGPV PDNITDVQGR MKDIQYSSRT RLVTDMLQRS QRFRHVLREV LDRVPSDQRD DPWCKLAEDL SCSKRYNVVH LIYRHKEYEG HYKDFQFGLS TMREHWQSGL EDIRHSLAQP DWLDMPDNDA GFVTHDIHRD AR
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