Gene Bphyt_1375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1375 
Symbol 
ID6281998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1533656 
End bp1534438 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content59% 
IMG OID642620935 
Producthypothetical protein 
Protein accessionYP_001895014 
Protein GI187923372 
COG category[S] Function unknown 
COG ID[COG3022] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.508327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00492897 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATAATCG TTCTGTCGCC GGCGAAATCG CTCGACTACG AAACCCCGCC TCACGTCAGA 
AAGCACACGA TCCCCGATTT TGTCGACGAC GCGGCCGAAT TGATCGGCGG ATTGCGCCGT
TTGTCGCCGC AGCAGATCGC TTCCTTGATG GACATTTCGG ATCAACTCGC GCACCTCAAT
TTCCAGCGTT ACGCGGAGTG GTCGCCCAAG TTCGGCACGC ACAATGCCAA GCAGGCGGTG
CTGGCGTTCA ACGGCGACGT GTACGAGGGC TTTAACGCGA AGACGCTGTC ATCGGCCGAT
CTGGACTATG CGCAGAATCA CGTGCGCGTG TTGTCCGGCC TGTACGGTTT GCTGCGTCCG
CTTGATCTGC TGCAGCCTTA CCGGCTCGAA ATGGGTACGC GTTTCGCTAA CCCGCGAGGC
AAGGATCTGT ACGCGTTCTG GGGCGAGCGG ATCACACAGG CGTTGAATGC GCAACTGAAG
AAGAACGCGG TGGCGTCGCG CGTGCTGGTG AATTGCGCAT CGGGCGAATA TTTCAAATCG
GTCAAGCCGA AGCTGCTCGA AGCGCCGATC ATCACGCCTG TTTTCGAAGA CTGGAAGGGC
GGCCGCTACA AGATCATCAG CTTCCACGCA AAGCGCGCGC GTGGACTGAT GGCGCGCTAT
GCCGTTGAGA ACCGCATCGA CAGGCCCGAG CAACTGAAGG ACTTCGACGC CGACGGCTAC
GCGTTCGACG CCGAAGCCTC GAACGATTCC ACTTACGTAT TCCGCCGCCG CGTCGTTGAA
TAA
 
Protein sequence
MIIVLSPAKS LDYETPPHVR KHTIPDFVDD AAELIGGLRR LSPQQIASLM DISDQLAHLN 
FQRYAEWSPK FGTHNAKQAV LAFNGDVYEG FNAKTLSSAD LDYAQNHVRV LSGLYGLLRP
LDLLQPYRLE MGTRFANPRG KDLYAFWGER ITQALNAQLK KNAVASRVLV NCASGEYFKS
VKPKLLEAPI ITPVFEDWKG GRYKIISFHA KRARGLMARY AVENRIDRPE QLKDFDADGY
AFDAEASNDS TYVFRRRVVE