Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1375 |
Symbol | |
ID | 6281998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1533656 |
End bp | 1534438 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642620935 |
Product | hypothetical protein |
Protein accession | YP_001895014 |
Protein GI | 187923372 |
COG category | [S] Function unknown |
COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.508327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00492897 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATAATCG TTCTGTCGCC GGCGAAATCG CTCGACTACG AAACCCCGCC TCACGTCAGA AAGCACACGA TCCCCGATTT TGTCGACGAC GCGGCCGAAT TGATCGGCGG ATTGCGCCGT TTGTCGCCGC AGCAGATCGC TTCCTTGATG GACATTTCGG ATCAACTCGC GCACCTCAAT TTCCAGCGTT ACGCGGAGTG GTCGCCCAAG TTCGGCACGC ACAATGCCAA GCAGGCGGTG CTGGCGTTCA ACGGCGACGT GTACGAGGGC TTTAACGCGA AGACGCTGTC ATCGGCCGAT CTGGACTATG CGCAGAATCA CGTGCGCGTG TTGTCCGGCC TGTACGGTTT GCTGCGTCCG CTTGATCTGC TGCAGCCTTA CCGGCTCGAA ATGGGTACGC GTTTCGCTAA CCCGCGAGGC AAGGATCTGT ACGCGTTCTG GGGCGAGCGG ATCACACAGG CGTTGAATGC GCAACTGAAG AAGAACGCGG TGGCGTCGCG CGTGCTGGTG AATTGCGCAT CGGGCGAATA TTTCAAATCG GTCAAGCCGA AGCTGCTCGA AGCGCCGATC ATCACGCCTG TTTTCGAAGA CTGGAAGGGC GGCCGCTACA AGATCATCAG CTTCCACGCA AAGCGCGCGC GTGGACTGAT GGCGCGCTAT GCCGTTGAGA ACCGCATCGA CAGGCCCGAG CAACTGAAGG ACTTCGACGC CGACGGCTAC GCGTTCGACG CCGAAGCCTC GAACGATTCC ACTTACGTAT TCCGCCGCCG CGTCGTTGAA TAA
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Protein sequence | MIIVLSPAKS LDYETPPHVR KHTIPDFVDD AAELIGGLRR LSPQQIASLM DISDQLAHLN FQRYAEWSPK FGTHNAKQAV LAFNGDVYEG FNAKTLSSAD LDYAQNHVRV LSGLYGLLRP LDLLQPYRLE MGTRFANPRG KDLYAFWGER ITQALNAQLK KNAVASRVLV NCASGEYFKS VKPKLLEAPI ITPVFEDWKG GRYKIISFHA KRARGLMARY AVENRIDRPE QLKDFDADGY AFDAEASNDS TYVFRRRVVE
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