Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1361 |
Symbol | |
ID | 6281053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1520593 |
End bp | 1521018 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642620921 |
Product | protein of unknown function DUF1178 |
Protein accession | YP_001895000 |
Protein GI | 187923358 |
COG category | [S] Function unknown |
COG ID | [COG5319] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.114069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00762425 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAGGTCC TCGATTTACA GTGTCCGCAT GGCCATCGGT TCGAAGGCTG GTTCGCTTCG GCTGATGACT TCGAATCGCA GCAGTCCCGC AAGCTCGTCG AATGTCCGAT CTGCGGTGCG AACGAGGTGA GCCGTTTGCC GTCGGCCCCG CGCCTGAACC TGTCGGGTGC GACCGAAACG AAAGCGCCAG CGGGCGCGGG GGAAATGCAG GCGCGTGTAA TGCGCGCCTT GCGCGAGGTG CTGGAAAAGA CCGAGAACGT GGGCGACCGC TTCGCCGAGG AAGCACGGCG CATTCACTAC AATGAAGCGC CCGCACGCAA TATTCGCGGT GTCACGACAC CGGAAGACGC GAAAGCCTTG GTCGAAGAAG GCATCGAAGT GATGCCGCTG CCGGTCCCGG CTGCCTTGAA GGAACCGCTG CAATAG
|
Protein sequence | MKVLDLQCPH GHRFEGWFAS ADDFESQQSR KLVECPICGA NEVSRLPSAP RLNLSGATET KAPAGAGEMQ ARVMRALREV LEKTENVGDR FAEEARRIHY NEAPARNIRG VTTPEDAKAL VEEGIEVMPL PVPAALKEPL Q
|
| |