Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1345 |
Symbol | |
ID | 6282441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1504123 |
End bp | 1504725 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642620905 |
Product | NADH dehydrogenase subunit C |
Protein accession | YP_001894984 |
Protein GI | 187923342 |
COG category | [C] Energy production and conversion |
COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000229518 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00575892 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAAGCA AACTCGAGAC CCTGAAAGCG AACCTCGAGG CGGCCTTTGG CGGCCTCCTG CTGAACCTCA GCGAAGCAAT CGGTGAGTTG ACGATCGTCG TGAAGGCTAG CGACTACCTC AACGTTGCAA CGCGTCTGCG CGACGACCGC TCGCTCGGCT TCGAGCAATG CGTGGATCTG TGCGGCGTCG ACTATCAGAC TTACGCTGAA GGCGCTTACG ACGGTCCGCG TTTCGCGGCC GTGCTGCATT TGCTGTCGGT GCAGAACAAC TGGCGTCTGC GTCTGCGCGT GTTCGCGCCG GACGACGAAG TGCCGATCCT GCCTTCTGTC GTCGAAATCT GGAATTCGGT CAACTGGTAC GAGCGCGAAG CATTCGACCT GTACGGCATC GTCTTCGAAG GCCATCCGGA TCTGCGCCGC ATCCTCACCG ATTACGGTTT CATTGGTCAC CCGTTCCGCA AAGATTTCCC TGTCTCCGGT TATGTCGAAA TGCGTTACGA CCCGGAAGAG AAGCGCGTCG TCTATCAGCC TGTGACGATC GAGCCGCGAG AAATCACGCC GCGCGTGATC CGCGAAGATC GCTATGGCGG TCTGAAACAC TAA
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Protein sequence | MASKLETLKA NLEAAFGGLL LNLSEAIGEL TIVVKASDYL NVATRLRDDR SLGFEQCVDL CGVDYQTYAE GAYDGPRFAA VLHLLSVQNN WRLRLRVFAP DDEVPILPSV VEIWNSVNWY EREAFDLYGI VFEGHPDLRR ILTDYGFIGH PFRKDFPVSG YVEMRYDPEE KRVVYQPVTI EPREITPRVI REDRYGGLKH
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