Gene Bphyt_1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1320 
Symbol 
ID6283975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1478773 
End bp1479498 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content58% 
IMG OID642620879 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001894959 
Protein GI187923317 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0767739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.281979 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCCA AACCTCCCCG CCGCACGCGC GAACGGATTC TCGAGCTGTC GTTGAAGCTG 
TTCAACGAAA TCGGCGAGCC GAACGTCACG ACGACGACGA TCGCCGAGGA AATGGAAATC
AGTCCAGGCA ACCTGTACTA CCACTTCCGC AACAAAGACG ACATCATCAA CAGCATCTTC
AGCCAGTTCG AGCAGGAGAT CGAAAAGCGT CTGCGTTTCC CCGACGACCA TCGCGCGACC
ATCGACGAAA TGTGGTCGTA TCTGCAGTAC ATGGTCGATT TCACCTGGCG TTATCGTTTC
CTGTATCGTG ATCTGAACGA TCTGCTGGCG CGAAATCGCA CGCTTGAAAC GCACTTCAAG
CAGATCATCA GCCACAAGGT GCGTTTCGCG AGCCAGTTCT GCGAACAACT CGTCGCCGAC
GGCGAAATGG TCGTCACGCC GGAAGAGCTT CACGTAATCG CCACCAACGT CGGCGTGATC
GGCACGTACT GGCTCTCGTA TCAGTTCGTG ATGAACCCGC GCAAATACAA CGAGCAGGAA
GCGATTCGCG CGGAGCTGCA TCAGGTGAGC GTGCAGATCG TGTCGCTCAT GGCGCCCTAT
CTGCGCGGCC GCTCGCGGCA GATTTTCGAC GACCTCGTGT CGGGCAAGCT GCCCAAGCGC
GAGTTTTACG ACTACCTGCC GCCCAAGGAA GGCGCCGCGC CCCGCAACGA ACCGAAGGAC
GTTTGA
 
Protein sequence
MEAKPPRRTR ERILELSLKL FNEIGEPNVT TTTIAEEMEI SPGNLYYHFR NKDDIINSIF 
SQFEQEIEKR LRFPDDHRAT IDEMWSYLQY MVDFTWRYRF LYRDLNDLLA RNRTLETHFK
QIISHKVRFA SQFCEQLVAD GEMVVTPEEL HVIATNVGVI GTYWLSYQFV MNPRKYNEQE
AIRAELHQVS VQIVSLMAPY LRGRSRQIFD DLVSGKLPKR EFYDYLPPKE GAAPRNEPKD
V