Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1312 |
Symbol | |
ID | 6282095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1471557 |
End bp | 1472255 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642620871 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_001894951 |
Protein GI | 187923309 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.1865 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGACC CGAGCATCAC CGTCGTCCTG ATCGAAGATG AAAAGCAGAT TCGCCGCTTC GTGCGAACGG CGCTGGAAGG CGAGGGCATC GTCGTGCATG ACGCCGAGAC CGGCAAGCAG GGTCTCGTCG AAGCCGCGAC GCGCAAGCCC GATCTGGTGA TCGTCGATCT CGGCCTGCCC GACACCGACG GTCTCGACGT GATCCGCGAA CTGCGCGGCT GGAGCGAGTT GCCGGTGATC GTGCTGTCGG CGCGTACCCA GGAAAGCGAA AAAGTCGCCG CGCTCGATGC CGGCGCGGAC GATTACCTCA CCAAGCCGTT CGGCGTGTCC GAGTTGCTGG CGCGGATTCG CGCGCATATG CGGCGCCGGA ATCAGGGCGG CGCCAACGAA ACACCGCAGG TGCGCTTCGG CACGGTGACC GTCGATCTGG CCTTGCGGCA GGTGAGCCGC GACGGCGCGG TGGTCCATCT GACGCCGATC GAGTACCGGC TGCTCGCGAC GCTGGTGCGC CATGCCGGCC GCGTGCTGAC GCATCGCCAA TTGCTGCGCG AGGTGTGGGG GCCGTCGCAT GTCGAGAGCC ATCACTATTT GCGCATCTAT ATGGCGCATC TGCGCGGCAA GCTGGAGCGC GACCCGGCGC AACCGGAGCA CATCATCACG GAAACGGGTG TCGGATACCG GCTGGTGGGC GCGATTTGA
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Protein sequence | MSDPSITVVL IEDEKQIRRF VRTALEGEGI VVHDAETGKQ GLVEAATRKP DLVIVDLGLP DTDGLDVIRE LRGWSELPVI VLSARTQESE KVAALDAGAD DYLTKPFGVS ELLARIRAHM RRRNQGGANE TPQVRFGTVT VDLALRQVSR DGAVVHLTPI EYRLLATLVR HAGRVLTHRQ LLREVWGPSH VESHHYLRIY MAHLRGKLER DPAQPEHIIT ETGVGYRLVG AI
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