Gene Bphyt_1299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1299 
Symbol 
ID6282963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1456235 
End bp1457158 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content65% 
IMG OID642620858 
Productcoproporphyrinogen III oxidase 
Protein accessionYP_001894938 
Protein GI187923296 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0408] Coproporphyrinogen III oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0514179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATT CGAGCTACGA CGCACAGGCC GTGCGCAGCT GGCTGCAAGG CCTGCAAACG 
CATATCGCGG ACACGCTCGG CGCGTTCGAC GGCACGCCGT TCGCCACCGA CGCATGGCAG
CGGGCGCCCG GCGAGAAGCT GCGCGGCGGC GGCTACACGC GGATTCTGGA AGGCGGCAAG
TTCTTCGAGC GGGCCGGCAT CGGTTTCTCG GACGTCGCGG GCGACGCCTT GCCAGGTTCG
GCGAGCGCGG CCCGTCCGCA ACTGGCCGGT CGCGGCTTCG AGGCGATGGG CGTGTCGCTC
GTGCTGCATC CGCACAATCC GCACTGCCCG ACCGTGCATA TGAACGTGCG TCTGCTGATC
GCGACCAAGC CCGGCGAAGA GCCGGTGTTC TGGTTCGGCG GCGGCATGGA TCTGACGCCG
TACTACGGCT ACGAGGAAGA CGCGCGGCAT TTCCATCGCA CCTGCCGCGA CGCGCTGCAG
CCTTATGGCG CGGACCTCTA CCCGAGTTTC AAGCGCTGGT GCGACGAGTA TTTCTTCCTC
AAGCACCGCA ACGAAGCGCG TGGCATCGGC GGAATTTTCT TCGACGATTT TTCGGCGCCA
GGCTTCGATC AATCGTTCGC GATGCTCAAA AGTGTGGGCG ACGCGTTCCT CAAAGCGTAC
CTGCCGATCG TCGAAAAGCG CCGCAACATT CCGTACGGTC AGGCCGAGCG CGATTTCCAG
GCCTACCGGC GCGGGCGCTA CGTCGAGTTC AATCTGGTCT TCGACCGTGG CACACTGTTT
GGGCTGCAGA GCGGCGGGCG CACGGAATCG ATCCTGATGT CCATGCCGCC TGTGGTGAAC
TGGCGCTACA ACTGGCACCC CGAACCGGGC ACGCCGGAAG CGCGTCTTTA TAGCGATTTT
CTCGTGCCGC GCGAGTGGGT GTGA
 
Protein sequence
MTDSSYDAQA VRSWLQGLQT HIADTLGAFD GTPFATDAWQ RAPGEKLRGG GYTRILEGGK 
FFERAGIGFS DVAGDALPGS ASAARPQLAG RGFEAMGVSL VLHPHNPHCP TVHMNVRLLI
ATKPGEEPVF WFGGGMDLTP YYGYEEDARH FHRTCRDALQ PYGADLYPSF KRWCDEYFFL
KHRNEARGIG GIFFDDFSAP GFDQSFAMLK SVGDAFLKAY LPIVEKRRNI PYGQAERDFQ
AYRRGRYVEF NLVFDRGTLF GLQSGGRTES ILMSMPPVVN WRYNWHPEPG TPEARLYSDF
LVPREWV