| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1280 |
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| Symbol | |
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| ID | 6283481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1436798 |
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| End bp | 1437607 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642620839 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_001894919 |
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| Protein GI | 187923277 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.138834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.117258 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATC TCCTGACCCG ACTTTTTCAC TTCCAGCCGT CGTTGCTCGT CACGCTGACG
CACGACGCCC TGCATATCGT GCTGGCCGTG CTGATCCTCG CGCTCGGCTG GTGGCTGTCG
AACCGCGTCG GCTCCATGTT CGCCCGCGCG CTCGCGCGCA CACATGCTGA CCCGACCCTC
GCGCCGATGC TGGCGGCCAT GGGCACCTGG GCCGTGCGGG TGCTCGTTTT CATCGCGGCG
CTCAGCGAAG TCGGCATCGC GACCGCAAGC GTGCTTGCGG TGCTGGGCGC CGCCGGTCTC
GCAATTGGGC TCGCGCTGCA AGGCACGCTG CAAAATATCG CGGCCGGCAT GATGCTGTTG
ATGCTGCGGC CGTTTCGCGT CGGCGATGTG ATCGAAGGCA GCGGCGCGGC AGCAGGCATC
GTGCGCGAAG TGGGGCTCTT CACCACCCGC ATCGAACGCG GCGACGGCAA TGCCGTGTTC
GTGCCGAACA GCCAGATCTG GAGCAATCCG GTGATCAACT ACAGCAGCGG CGGCACGCAG
CGCATCGAGG TCGAAGTGGG CCTCGCGCAG CGCAAGGACG TCGACGCCGC GATCGGCGAA
TTGAAGAAAC TCGTCGCCGA CGAACCGCGC GTGCTGGGCG GTGCCACGCT CGCGCCGATC
GTGACGGTCG CGGACTATCC GGACGATGGC GGCGCGACGC TGCGCATCGC GGCGTGGGTG
CGCACGCCGG ACGCGTCGCT GACCAGCGGC GACCTGCACG AGCACGCGCA GGCCGCGCTC
GAACAGGCCG GTTGCCCGGT AGCGGCGTAG
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| Protein sequence | MNDLLTRLFH FQPSLLVTLT HDALHIVLAV LILALGWWLS NRVGSMFARA LARTHADPTL
APMLAAMGTW AVRVLVFIAA LSEVGIATAS VLAVLGAAGL AIGLALQGTL QNIAAGMMLL
MLRPFRVGDV IEGSGAAAGI VREVGLFTTR IERGDGNAVF VPNSQIWSNP VINYSSGGTQ
RIEVEVGLAQ RKDVDAAIGE LKKLVADEPR VLGGATLAPI VTVADYPDDG GATLRIAAWV
RTPDASLTSG DLHEHAQAAL EQAGCPVAA
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