Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1270 |
Symbol | |
ID | 6281219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 1427608 |
End bp | 1428132 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642620829 |
Product | Spore coat U domain protein |
Protein accession | YP_001894909 |
Protein GI | 187923267 |
COG category | [S] Function unknown |
COG ID | [COG5430] Uncharacterized secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.248061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0373463 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAA AATTGCTGTC ATCCAGCTTG ATCGTCGCCT TGATGTTCGG CTTGCCTTTG CAGCTCGCGC ACGCCGCGGT TTATTCGAAC GGCACCGCAG TCACCACCTT TACCGTCACG CTCACGCTCA ACGCCAATTG CTCGATCAGC GCCAACCCGC TGAACTTCGG CACGAACGGC GTGCTCGCCA CCGCCATCAA CCAGCAGACC ACGGTTGCCG TGACCTGCAC CAACACCACG CCGTACAACG TCGGGCTCGA CGCCGGCACC GTCACCGGCT CAACCGTGAC CAATCGCCTG ATGGCCGGCA CCGCCACCGG CAACACGTCC ACTACCGTCG GCTTCCAGCT GTATCAGGAC GCCGGCCACA CCACGGCGTG GGGCAACACC CAAGGTACGA ATACCGTCAG CGGCACCGGC ACCGGGTCGG CGCAATCGAT TGTGGTGTAC GGTCAGGTGC CCGCGCAGAC CACGCCGAAA CCTGACACCT ACCAGACCAC CATCACCGCC ACGGTCTACT TTTGA
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Protein sequence | MKQKLLSSSL IVALMFGLPL QLAHAAVYSN GTAVTTFTVT LTLNANCSIS ANPLNFGTNG VLATAINQQT TVAVTCTNTT PYNVGLDAGT VTGSTVTNRL MAGTATGNTS TTVGFQLYQD AGHTTAWGNT QGTNTVSGTG TGSAQSIVVY GQVPAQTTPK PDTYQTTITA TVYF
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