| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1267 |
|---|
| Symbol | |
|---|
| ID | 6281837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 1423113 |
|---|
| End bp | 1424069 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642620826 |
|---|
| Product | Spore coat U domain protein |
|---|
| Protein accession | YP_001894906 |
|---|
| Protein GI | 187923264 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5430] Uncharacterized secreted protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0483759 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.279584 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGGC TCCTGCTGCT CCTCGCACTA TGCGCCCTGC TCGGCATCAT GCCGCGCCAC
GTTAGCGCGC AGACCTGCAC GGCGAGTCCG TCGGCGCTAA GCTTCGGCAA CGTGAGCCCC
ATCAGCCTCA GCGCCGTGGC CGCAACCGGC AGCGTCACGG TGCAATGCAC GTGGCCCGCG
GTCACGCTGA CGCCGAGTGT GCAGGTGTGC CTGAACATGG GCGGCACGAC GCCGCGCCAT
CTGAGCGCCG GCAGCAACCA GCTGCAATAC GATCTGTACC AGGACGCGGC GCATTCGCTC
GCATGGGGCT CGAGCACGCT CGGCACGACG CCGATATCGC TGACGCTGGA GAAACCGGTG
AGCGGCACGA CCGCCTCAGC GACGGTCAAT TTCTACGGCC AGATCGCCGC CAATCAGCCG
GCCGTGCCGA CCACAGGTAA CAGCAGCACC AGTTATTCAC AGACGTTGAG CCAAACCTCT
CTGACCTACG CCTTCTTTCT GCTGCTCGGG CCGACATGCG CCTCGCTGAC GACGAGCGCC
GGCAGCTTCG GTTTCACCGT CAACGCAACG GTCGTCAACA ACTGCCTGAT CAGCGCGACG
AACATCGCGT TCACGTCGAC GGGCGTGCTC AGCTCCGCAC TCAACGCGAC TGGCGCGATC
ACGGCGCGCT GCACCAACGG CGACGCGTAC CGGATCGCGC TCAGCAGCGG CTCGAGCGGC
AACGTCGCGG CCCGGCAGAT GCAGCGCTCA GGCGGCGGCG GCACGGTGAA TTACCAGCTC
TACACGGATT CAGGCCACAC AAGCGCCTGG GGTGACGGCA CGGCCGGCAC CACGATGGCC
ACCGGCACGG GTAGCGGCAA TGCCCTATCG ATCAACGTGT ATGGCCGCGT GCCGGCACAG
AGCACTCCCA TGCCGGGCAG CTACAGCGAC ACGATCACCG CGACGATCAC TTTCTGA
|
|---|
| Protein sequence | MKRLLLLLAL CALLGIMPRH VSAQTCTASP SALSFGNVSP ISLSAVAATG SVTVQCTWPA
VTLTPSVQVC LNMGGTTPRH LSAGSNQLQY DLYQDAAHSL AWGSSTLGTT PISLTLEKPV
SGTTASATVN FYGQIAANQP AVPTTGNSST SYSQTLSQTS LTYAFFLLLG PTCASLTTSA
GSFGFTVNAT VVNNCLISAT NIAFTSTGVL SSALNATGAI TARCTNGDAY RIALSSGSSG
NVAARQMQRS GGGGTVNYQL YTDSGHTSAW GDGTAGTTMA TGTGSGNALS INVYGRVPAQ
STPMPGSYSD TITATITF
|
|---|
| |