| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1239 |
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| Symbol | |
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| ID | 6282664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1385408 |
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| End bp | 1387288 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642620798 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_001894878 |
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| Protein GI | 187923236 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCAC TCATCGAAGA CTATGCGCTC ATCGGCGACG GCCATACGGC CGCGCTAGTT
TCCCGCGATG GATCGGTCGA CTGGCTCTGC TGGCCGCGCT TCGATTCGGG CGCCTGCTTC
GCCGCCCTGC TCGGCACGCC CGAAAACGGC CGCTGGCTGA TCGCGCCGGT CTCGGACACG
CCGCCGACCA TCACCCGGCG CTATCGCGGC GAAACGCTGA TCCTCGAAAC CGACTTCGAG
ACGCCCGAGG GCGCCATCAC GCTGATCGAT TTCATGCCGC CGGGTAACGG CTGGTCGGAG
ATGGTGCGGC TCGTGGTCGG CAGACGCGGC ACCGTGCGCA TGAAAATGGA ACTGGTGCTG
CGCTTCGATT ACGGCTTTTC GGTGCCGTGG GTCGACCGCC TGACGCACGA CAGCGGCATC
AAGGCGATCG TCGGACCGGA CACCGCCGTG TTGCGCACGC CGGTCGAATT GCGCGGCGAA
GACATGAAGA CGGTCGCCGA ATTCACTGTC AGCGAAGGCG AACGGGTGCC GTTCTCGCTT
GCTTACGCGG CCTCGCATCT GCGCATTCCG CCGGCGCGCG ATCCGCACAC CTCGCTGGCA
CGCACCGAGA ATCACTGGCT CGAATGGTCG GCGCGCAGCA CGGTTGAAGG ACGCTGGGCC
GAACCGATCC GCCGGTCGCT GATCACGCTG AAGGCGCTCG CTTACGAGCC GACCGGCGGC
ATCGTCGCCG CGCCTACTAC TTCGCTGCCG GAGCAGCTCG GCGGCACGCG CAACTGGGAC
TATCGCTACT GCTGGCTGCG CGACGCGACC ATCACGCTGC TCGCCATGAT GCGCGGCGGC
TACTACGACG AAGCGCGCGC GTGGCGCAGC TGGCTCGGCC GCGTGATGGC CGGTGCGCCG
GATCAATTGC AGATCATGTA CGGCATCGCC GGCGAGCGCC GTCTGCCTGA GTTCGAAATC
GACTGGCTGC GGGGCTATCA GGACGCGAAA CCGGTGCGGA TCGGCAATAA CGCGGTCGGC
CAGCGCCAGC TCGACGTCTA TGGCGAAGTG ATGAATGCGC TGCATCTGGC GCGCGTCGGC
GGCCTGCAGG CGGACGACAC CGCATGGAAC GTGCAACGCG CGCTGCTGAA GCACCTCGAC
ACGATCTGGC AGGAACCCGA CGAAGGCATC TGGGAAACAC GCGGCGGCCG CCAGCATTTC
ACTTTCTCGA AGGTCATGGC GTGGGTCGCG TATGACCGCG CGATCAAGTC GGCGGAAATG
TTCGAGCTCG AGGGCCCGCT CGACGAATGG CGCGCCACCC GCGCGCAAAT TCACGCGGAA
GTCTGCGAGA AGGCCTGGAA TCCCGCGCTC AACGCGTTCT CGCAGTGCTA CGGCACCGAC
CAGCTCGACG CGAGTGTGCT GCTGATGCCG TTAGTCGCCT TCCTGCCGCC GCACGATCCG
CGCGTGAAAG GCACCGTGGC CGCGATCGAA CGCGACCTGA TGCACGACGG CTTCGTGATG
CGCTATCGCA CGACCGAATA CGACGACGGC CTGCCGCCGG GAGAAGGGAC GTTTCTGGCG
TGCTCGTTCT GGATGGTGGA CAACCTGGCG CTGCAAGGCC GCCTCGACGA AGCGATCGCG
ATGTACGAAC GGCTGCTCGC GCTCTGCAAC GATGTTGGTT TGCTCGCGGA GGAGTACGAT
CCCGCTGCGA AGCGTCTGGT CGGCAATTTT CCGCAGGCGT TTTCGCACGT GGCGCTCGTG
CACACCGGCC TGAACCTGAT GAAACATGAA CAGGCCATGG CGCAGGCGAC CGGGCAGCCG
CCCCATAACG GCACTGGAGC CACGGAACTT GATGCTGCTG CAACCCCGGA TAGCGGCGCG
GCAACATCGC CAGTAGCATG A
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| Protein sequence | MSALIEDYAL IGDGHTAALV SRDGSVDWLC WPRFDSGACF AALLGTPENG RWLIAPVSDT
PPTITRRYRG ETLILETDFE TPEGAITLID FMPPGNGWSE MVRLVVGRRG TVRMKMELVL
RFDYGFSVPW VDRLTHDSGI KAIVGPDTAV LRTPVELRGE DMKTVAEFTV SEGERVPFSL
AYAASHLRIP PARDPHTSLA RTENHWLEWS ARSTVEGRWA EPIRRSLITL KALAYEPTGG
IVAAPTTSLP EQLGGTRNWD YRYCWLRDAT ITLLAMMRGG YYDEARAWRS WLGRVMAGAP
DQLQIMYGIA GERRLPEFEI DWLRGYQDAK PVRIGNNAVG QRQLDVYGEV MNALHLARVG
GLQADDTAWN VQRALLKHLD TIWQEPDEGI WETRGGRQHF TFSKVMAWVA YDRAIKSAEM
FELEGPLDEW RATRAQIHAE VCEKAWNPAL NAFSQCYGTD QLDASVLLMP LVAFLPPHDP
RVKGTVAAIE RDLMHDGFVM RYRTTEYDDG LPPGEGTFLA CSFWMVDNLA LQGRLDEAIA
MYERLLALCN DVGLLAEEYD PAAKRLVGNF PQAFSHVALV HTGLNLMKHE QAMAQATGQP
PHNGTGATEL DAAATPDSGA ATSPVA
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