| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1237 |
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| Symbol | |
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| ID | 6282662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1383222 |
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| End bp | 1383854 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642620796 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_001894876 |
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| Protein GI | 187923234 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.665439 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGC CGAAAATCAA AAGAGATCCT GAAGGCACAC GGCGCCGCAT TCTGCTCGCG
GCGGCCGAAG AGTTTGCAAA TGGTGGGCTA TTCGGCGCGC GCGTCGATCA GATCGCTCGC
CGCGCGGAAA CGAATGAGCG CATGCTCTAT TACTACTTCG GTAGCAAGGA GCAACTTTTC
ACCGCGGTAC TCGAGCACGC GTTCAGCGCG CTCAACGAAG CGGAGCGCAC GCTCGAACTC
AATGGCATTG CCCCGGTCGA GGCCATCACG CGTCTCGCGC ATTTTGTTTG GGATTACTAC
CGCGATCACC CCGAGCTGCT GCGTCTCATC AATAACGAGA ATCTGCACGA AGCACGCTAT
ATGCAGAAGT CCACGCGCAT CCGCGAAATG ATCTCGCCGA TCGTCGCCAC GCTCGGCGGC
ATTCTCGAGC GCGGTCAACG CGCGGGGCTG TTTCGCACCA ATGTCGATCC GCTGCGCTTC
TATGTCACCC TGTCCGGCAT GGGCTATTAC ATCGTGTCGA ACCGCTTTAC GCTCGAAGCC
ACCCTCGGCC GCGATTTCAG CAGCGCGAGC GAGCGCAGTG AAGTGATTCA GATGAACACC
GAGTTGCTGC TCGCCTATCT GTTGCGAAAG TAA
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| Protein sequence | MNQPKIKRDP EGTRRRILLA AAEEFANGGL FGARVDQIAR RAETNERMLY YYFGSKEQLF
TAVLEHAFSA LNEAERTLEL NGIAPVEAIT RLAHFVWDYY RDHPELLRLI NNENLHEARY
MQKSTRIREM ISPIVATLGG ILERGQRAGL FRTNVDPLRF YVTLSGMGYY IVSNRFTLEA
TLGRDFSSAS ERSEVIQMNT ELLLAYLLRK
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