| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1219 |
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| Symbol | |
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| ID | 6284615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1365384 |
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| End bp | 1367198 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642620778 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001894858 |
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| Protein GI | 187923216 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGAAC ACGAATTCCC ATTCCCCACG AGCGTCTCCA ACGATCTCGG CGCGATGACC
GCACATGCCG ACGCCTGCTT CGCCGCGGGG CGTCATCACG AAGCAATTGC CGACTACCAG
CGCGTTCTTG CCGAACAGCC GCACAACGTA CACGCGCTGC ATCGGCTCGG CCTCGCCTTG
TTTTGCGTCG ATCGGCCCGA CCGCTCGCGC GAGCATTTCG ATCAGGCATT GAACGTCGCG
CCTGAGCGCG CGGATATCTG GGAGCATCGC GGTTTGATCG CCGCGCTGGA CGGCGAGCTG
ATCGCGGCCG AAGCGTTCTA CTATCGCGCG GTGGGCCTCG GTGGCGGGAC CGTGAGCCTG
CATCGAAATC TGGGCGATTG CCTGACGCTG TCGGAGCGTC TCGTCGAAGC ACGCGGCCAC
TACCTCAAGG CGCTTGAACT CGAACCGACG TTGCATCACG CCGTTCGCTC GCTCGCACGA
ATCGGTACCG AGCTCGAACG TTATCAGGAC GCAGCGGACT ACTGGCTGCG TGCATGGGCG
CTCGACCCGA CGCATCTGCC GGACGCGCTC GACCTGATTA CCGCGTTGTC GAGAGCACAG
CGCGGCGAGA GGATCGACAG CGTGCTTGCC GAACTGCGCG TTCGCTTTGC ATCAGACGCA
TCCGCGTTTC AACAGGTGGC CTTTGCATTT AACAACGCGG AGCGTTTCAG CGATGCAATC
AGCGTCGCCA TCGAAGCGCT CGGCGTCGAT CCGCGAAACG GCTGGCTGCA TCACAACGCG
TCGTTTGCGT TCAACATGCT GGGCGACTTC CCGGCCATGC ACGCGCATGC CGCCGAAGCC
GCGCGGCTGA TGCCCGATCA TCCGCTGATG CAGTTCAACC TCGCCGCCGC ACAACTGCGT
GCCGGCGACT ACGAAAACGG CTGGAAGCAA TATCGGTGGC ATGAAGCCCT GCCGGAAAAT
CACGACCTGG TTCGCCCGGC TTATCCAGAA TGGCAAGGAG AGCGCGTAAC GGGCCGCCGC
TTTCTGCTCG TCGGCGAGCA GGGGCTGGGC GATCAACTGC AGTTCTTGTG TATGGCCGAC
TGGTTGAATA AGCGCGGCGC ACAGGTCGAC GTCTGGGTCG AGGCTCCGCT TGGCGAAGTG
GCGCGAAGCG CCGCCGGCGT ACGTGCCGCA TGGACGACCG CGCCGCCCGG ACCGTACGAC
TACTGGTGCC GCATGCTCAG CATGCCGGAG CCGATGAAGC TGGACCTGCC GATGTTGCCG
CTCGCGACGT CGTATCTGCG AGCGGAACCC GCGCAGGTGC AACGTTGGCG GAGCCGGCTC
GACGCAATCT GTGCGGCCGA TACACGCGAA GCGCCCGCAA AACGCGTCGG CATTGTCTGG
GCCGGTAATC CGGCGTACGA GCTCGATCGG TATCGGTCGA TTCCGTTGCG CCATTGGCTA
CCGGTTTTGC AACAGACCGG TGTGCACTGG TTCGCGCTGC AAAAGGGCGA GACGCAGAAC
GAGGCAGCGT CGTGTGCGGA TTTGAGCATG CACAGCCTCG GGCCGGAGAT CGGTACGTTT
GCCGACACGC TGGCGATCGT GCAGTCGCTC GATCTGGTCA TTACGGTGGA CACGGCGGTT
GCGCATCTGG CCGGCGCATG CGGCACGCCG GTCTGGGTGC TGGTGCCGAC GTTCACCGAC
TGGCGCTGGC TGACGGAGCG CGACGATAGT CCGTGGTATC CGTCCGCGCG ACTGTTCAGG
CAGCGTGAGT TGGGACGTTG GGATACGGTA CTCGACGAGG TCGCACAAGC ATTGCACGAT
TTTGTCGCTG GCTGA
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| Protein sequence | MHEHEFPFPT SVSNDLGAMT AHADACFAAG RHHEAIADYQ RVLAEQPHNV HALHRLGLAL
FCVDRPDRSR EHFDQALNVA PERADIWEHR GLIAALDGEL IAAEAFYYRA VGLGGGTVSL
HRNLGDCLTL SERLVEARGH YLKALELEPT LHHAVRSLAR IGTELERYQD AADYWLRAWA
LDPTHLPDAL DLITALSRAQ RGERIDSVLA ELRVRFASDA SAFQQVAFAF NNAERFSDAI
SVAIEALGVD PRNGWLHHNA SFAFNMLGDF PAMHAHAAEA ARLMPDHPLM QFNLAAAQLR
AGDYENGWKQ YRWHEALPEN HDLVRPAYPE WQGERVTGRR FLLVGEQGLG DQLQFLCMAD
WLNKRGAQVD VWVEAPLGEV ARSAAGVRAA WTTAPPGPYD YWCRMLSMPE PMKLDLPMLP
LATSYLRAEP AQVQRWRSRL DAICAADTRE APAKRVGIVW AGNPAYELDR YRSIPLRHWL
PVLQQTGVHW FALQKGETQN EAASCADLSM HSLGPEIGTF ADTLAIVQSL DLVITVDTAV
AHLAGACGTP VWVLVPTFTD WRWLTERDDS PWYPSARLFR QRELGRWDTV LDEVAQALHD
FVAG
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