| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1183 |
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| Symbol | |
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| ID | 6283830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1325632 |
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| End bp | 1327530 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642620743 |
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| Product | hypothetical protein |
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| Protein accession | YP_001894823 |
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| Protein GI | 187923181 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAG TAACTTTCCC CCTGACCGGA CACCAGTATT CCGACGACGG CAGTACCGAT
CGTGACATGC TTGACGGCGG TCATACAGAG TACCTGTTGC CGATGCTGCA GGAAACGGTT
GATACGGCCC GGTCGGCGAT CGATGCACGG GCTTCTGCGT TGGCGTCAGC AAGCCAGGCC
AGTGATCATG CGCAGGCTAC GGCTCATGAC GCGGTGATCG TGGCGCAAGA CCGTCAGGCC
GCTGAGGCGG CAGCTGCAGC GGCGCATGCT GATGCGGCGA CTGTCAATAT TCCGCTGCTG
ACCGGCAACG CGGGTCGCAT GCTGGGTGTG GCCGAGGACG GGGCGTCCAT GGCATGGGTC
GACATGAGTC CGTACACCCA GGATGCGGAT TTGGCCAGCC CTGACAAGGG CGTCAGGATG
GTCGCGCACG CTGTGGACGA TCGGGACCTG GCTGACCCGG AGAAGGGCGT ATCGATGGTT
GCCCATGCTG CCGACGATCG CCTGATTGCC GCACCGGGCG GTGCATCATT GGTCGGCTTC
AAAGGTGCAT TGGCCGGCTC CGTTGCGCGA ACGGTGGCAG ACGACCTTAA TGACGGTTAT
GCCAACCCGA AGCGCTTTGG CGCCAAAGGT AACGGCAGCG CCGACGACAC GGCAGCGATT
CAAGCGGCGA TTGATGTACT GGCCGCAGCC GGTGGCGGGG TGATCCGTTT TCCGAACGGC
AATTATTTTT GCAACGTCGT GCTCAAGGAC GGCGTGCATC TGGTCAGCGG TGCGGAGCAC
TTCGGTTATC TGGCTCAGGT AGATGGTCCG ATTGCCGGCG TCACCCTGTC GCAGGCGGCG
CCTGGTTTCG TGGTCGACAC GCCGGCCACC CTGAAGCGGG GCGTGCTGAG CGTAAAGGGC
ATCAACTTTC AGGGATTGGG TGCAGCCTAT GCCGGCGGAG GCGTGCGCTT CCAGGGAACC
AGGTGGGGAG CGATAAAGTG CTGCTCCGCC AATGGTTTCG CCGATCAGGC ATTTCTTCAC
AGGAACGGCT GGGGCGTGGT CTTCGAAGAT CTGCTGGCCA CCAACTGTCT CCTCGGTGCG
GCTCGCACCA GTGTCGTTGG GGTTCTGGAA ACGCACGGCA CGGACGACTT TATTAACAGA
GTCGAGATGG CCGGGCAGTC GGCCGCCTCC GTGACCGACG CAAATCTTTT TCGAGCGGCG
ATTGCTGTCT ATGGGGCTAA TAGTTTCTTG AGCAATGCGG TTGGGGAGCA AGCGGATCGT
GGGATTTACA TCGGTCCTCA GTCCGGAGCT GGCCATCGTA TGGCGTTGTG TCGCGGTGAT
AGTAACGGTG GCGTGGGATT CTGGATTGAC GGTAATGTGA TCGGCTCGGT TTGTACGGCC
TATAACAATA GCTTGGCAGG TTCTGGCCTT TACTCTGGCT TCTATGCCAG CGCGACATCG
AGCGGCTGCA AATTCTCTTC CTGTAGATCG GATGGTCACG ACGCGACGAT CCCGCAAAAG
TATGGCTATG AGGACTACGT CAGTAATTCG AACGCCAACG TCCGCAACAG CTACATTGAC
TGCGGCGGCT TCTACAACGC CTCGGGACTG TTTCTAACCC AAGGATTTCT CGGCTCAGGT
GTGGTCAATC CGCCTCAGGC CATCCGTCCA GCCGATGGCA CGACGATTGT GGACGTGACA
GGTACGAGCC TCGTGGTATT TGCAGGCTAT GCCACGGCGA CGACGGTGAC CAATTTTACG
GGGGGCGCGG AAGGGGACAC GATCCGCGTG CTCGGTGATG CACAGGTCAC GATCGCCAAT
GGCTCGGGCA TTAATACGCC CACCAATGCG GCCGTGGCGC TTGCGGATAA GACGATGTAC
ACCTTCACGC AATACAACGG TGTCTGGTAC ATGGGATAG
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| Protein sequence | MSKVTFPLTG HQYSDDGSTD RDMLDGGHTE YLLPMLQETV DTARSAIDAR ASALASASQA
SDHAQATAHD AVIVAQDRQA AEAAAAAAHA DAATVNIPLL TGNAGRMLGV AEDGASMAWV
DMSPYTQDAD LASPDKGVRM VAHAVDDRDL ADPEKGVSMV AHAADDRLIA APGGASLVGF
KGALAGSVAR TVADDLNDGY ANPKRFGAKG NGSADDTAAI QAAIDVLAAA GGGVIRFPNG
NYFCNVVLKD GVHLVSGAEH FGYLAQVDGP IAGVTLSQAA PGFVVDTPAT LKRGVLSVKG
INFQGLGAAY AGGGVRFQGT RWGAIKCCSA NGFADQAFLH RNGWGVVFED LLATNCLLGA
ARTSVVGVLE THGTDDFINR VEMAGQSAAS VTDANLFRAA IAVYGANSFL SNAVGEQADR
GIYIGPQSGA GHRMALCRGD SNGGVGFWID GNVIGSVCTA YNNSLAGSGL YSGFYASATS
SGCKFSSCRS DGHDATIPQK YGYEDYVSNS NANVRNSYID CGGFYNASGL FLTQGFLGSG
VVNPPQAIRP ADGTTIVDVT GTSLVVFAGY ATATTVTNFT GGAEGDTIRV LGDAQVTIAN
GSGINTPTNA AVALADKTMY TFTQYNGVWY MG
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