| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1140 |
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| Symbol | |
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| ID | 6282949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1283354 |
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| End bp | 1284811 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642620699 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001894780 |
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| Protein GI | 187923138 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCAC AACCACCGCG CAAGAACCGC GCCGACGGCA CCATCGCCGC CGAAGCGGCC
GACACACTCG CCCCCGATCC ATCGCTGCGC GACGACACCG AACAAGGCCT GCCGATTCCG
CAGCGCTACT GGGCGATGCT GGTTATCGCG CTATCCCTCA CGCTCGCGGT ACTCGACAGC
GCGATTGCCA ACGTGGCGCT GCCCACTATC GCGCGCAACC TGCACGCGAG CGCGGCCGGC
TCGATCTGGG TCGTCAACGC CTATCAGCTG GCGATCACCA TCTCGCTGTT GCCGCTCGCC
TCGCTCGGCG ACCGCATCGG CTACCGGCGT ATCTATCTGG CGGGGCTGAT TCTGTTCACG
GTGGCGTCGT TCGGTTGCGC GTTGTCGACT TCGCTGCCAA CCCTCGCGCT GGCTCGCGTG
ATTCAGGGGT TCGGCGCAGC AGGCATCATG AGCGTGAATA CGGCGCTGGT ACGCATGATC
TATCCGCCCG CGCAGCTCGG GCGCGGCGTC TCGATCAACG CGATGGTGGT CGCGGTGTCG
TCGGCGGTCG GGCCGACTGT CGCTTCCGGC GTGCTCGCGG TCGCCTCGTG GCCATGGCTG
TTCGCCATCA ACGTGCCGAT CGGCATCGCG GCTATCGTCG GCGGCTTCAA GGCGCTACCG
ATGAACCCCG GCCACGAATC GCCCTACGAC TATCCGAGCG CGGTGATGAA CGCGTTCGTG
TTCGGCCTGC TGATCTTTGC CGTCGACGGC CTCGGCCACG GCGAAGGATT CGGCTACGTC
GCGCTGGAAG CGCTCGGCGC GCTCGTGATC GGCTATTTCT TCGTGCGCCG CCAGTTGACG
CAGCCCGCTC CGTTGCTGCC GATCGATTTG CTCAGGATTC CCATCTTTGC GCTCTCGATC
GGCACCTCGG TCTGCTCGTT CTGCGCGCAG ATGCTCGCTT TCGTGTCGCT GCCCTTTCTG
TTGCAAGACA CACTCGGCTT ATCGCAGGTA GAGACCGGGC TACTCATGAC GCCCTGGCCT
GCCGTCATCA TCATCGCGGC GCCGATTGCC GGCGTGCTGT CGGACAAGGT GTCGTCGGGA
TGGCTGGGCG GCGTCGGTCT TGCCGCGATG ACGGCCGGGT TGTTGCTGCT CGCCACGCTC
GGCGCGCATC CGGACGCCAT GCAGATCGCG TGGCGAATGG CCTTGTGCGG CGCCGGCTTC
GGCATCTTTC AGTCGCCGAA CAATCGCACC ATGCTGTCCG CGGCGCCGCG CGAGCGCAGC
GGCGGCGCAA GCGGCATGCT GGGCACCGCG CGCCTGACGG GCCAGACGCT CGGCGCGGCG
CTGGTCGCGC TGATCTTCGG AATCGCGCCG CAACATGGAC CGACCGTCGC GCTTTACGTG
GCCGCGTGCT TTTCGGCGCT CGCCGCGGTG ATCAGCACGA TGCGCGTCAC GCAACGAGCC
AACGTGCAAC CGGCCTGA
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| Protein sequence | MHAQPPRKNR ADGTIAAEAA DTLAPDPSLR DDTEQGLPIP QRYWAMLVIA LSLTLAVLDS
AIANVALPTI ARNLHASAAG SIWVVNAYQL AITISLLPLA SLGDRIGYRR IYLAGLILFT
VASFGCALST SLPTLALARV IQGFGAAGIM SVNTALVRMI YPPAQLGRGV SINAMVVAVS
SAVGPTVASG VLAVASWPWL FAINVPIGIA AIVGGFKALP MNPGHESPYD YPSAVMNAFV
FGLLIFAVDG LGHGEGFGYV ALEALGALVI GYFFVRRQLT QPAPLLPIDL LRIPIFALSI
GTSVCSFCAQ MLAFVSLPFL LQDTLGLSQV ETGLLMTPWP AVIIIAAPIA GVLSDKVSSG
WLGGVGLAAM TAGLLLLATL GAHPDAMQIA WRMALCGAGF GIFQSPNNRT MLSAAPRERS
GGASGMLGTA RLTGQTLGAA LVALIFGIAP QHGPTVALYV AACFSALAAV ISTMRVTQRA
NVQPA
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