| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0995 |
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| Symbol | |
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| ID | 6282375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1116594 |
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| End bp | 1118483 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642620556 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001894638 |
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| Protein GI | 187922996 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.864049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTCCC CCATCGCCCG CGCGGCGCTG CTCGCCTTTG CGAGCCTGCC GATCGTCGTG
CACGCGCAAG CTGCGTCTTC AAGTGCATCT TCTTCCGCGC AGGATTCATC GGCTGCGGAG
CCGTCTGCGG CGGTGCTGTC GCCCGTGGTG GTGACCGCGG ATCGCGCGCC GCAAGCACTT
GTCGACACGA TCCCGCAGAC GTCTCTATTC GATCAGCAGG ATATCGCCGA CACCACCGCG
ACCGATTTGC CCGGCCTCCT GCAACTCGCA CCCGGCGCGC AAATCTCGCG CACAGGTGGT
CCCGGTTCGA CAGCCAGTCT CTCTTTACGC GGCGCGTCGT CGACGCAATC GCTGCTGCTG
ATCGACGGCG TGCGCGTCGA TTCGGTGAGT CTCGGTGCCC CGCAACTCGC GCAGATTCCG
CTCGACCAGA TCGATCACGT CGAGGTAGTG AACGGCAACG TGTCGGCGTT ATACGGCTCG
GGCGCGATCG GCGGCGTGGT GCAGGTGTTC ACGAAAGACG GCGGCGACCA TCCGCCCCGT
TTCAATTTTT CGCTCGGCTA CGGCAGCTAT CACACGCAGA CGCAGCAGGC GGGCGTGAAC
GGCGCATTGG ACAAAGACGG CAAGACGACC TTCAGCATTT CGCTCGCGCG TTCGAAGGAC
GACGGCTTTT CGTCGCTGAA CACGAAGGAG GCGCCCAACG CCAATCCGAA TGCGAACGGC
TATCTTAACG AGAGCATCTC GGCCTCGCTG CGTCACAAGT TCAACGACAG ATGGGACGCC
GGCGTCAGCT ACTTCCAGTC GAACGGCAAC AACAGCTACG ACAATGCGTA CGGTGTGCCG
ACCGATCTGA ACAACCTGTA TAGCAAGGTG CGCCAGGTCT CGGCGTTCGC GAACGGCAAG
CTGGCGGACT GGTGGACCAC GCACTTCATC GTCGCCGAGG GCGACGACCG CAGCGTGTCA
AACACCAACG GCGTGTACAA CGGCCGCTTC GATACCGACA ATCGCCAGTA CACATGGCAG
AACGATTTCG CGCTGGCCGC ACAGCAGAAG TTGCAGGTCG GCTATGAGCA TCTCGACCAG
AGCCTCGACT CGGACACGTT CGCGGCGCCG GATCGTCATG TGGATTCGGG CTTCGCCGGC
TATACGGGGC GCTTTGGACG CAACCAGATT CAGGCCAACG TGCGGCGCGA CCAGTATTCC
GATTTCGGCG GAGCGAACAG TTACTATCTC GGCTACGGCT TCGACATCAC CGGCCATTGG
AAGGTGAGCG CAAGCTATTC GGATTCGTTT CGCGCGCCGA GCTTCGACGA TCTGTACTAT
CCGTTCAGCG GCAATCCGTC TATCCAGCCG GAGCGCAGCC ATTCGATCGA AGCCGCGCTG
CAGTACGCAT CGAATGCGCT CGGCGTGATG CGTCTGACCG CATTCCAGAC GCGCTATTCG
AATCTGATCA ACTATGAGCA GGTGACGCCC GGCATCTATC TGGCCGAGAA CGTCGGGCAT
GCGAAGGTGC AAGGACTCGA AGGATCGTGG AGCGGCCATG TCGGCAAGAC GGACGTGCGC
GCTTCCGTAA CGCTGCAGAA TCCCGTCGAT CTCGACAACG ATGCCGACCT CGTGCGGCGC
GCCCGGCGCT TCGGCGCGCT GACGGTGAAC CGCAGCATCG CCGGGTGGCG TGTAGGCGGC
GAGTGGATCG TGAGCGGCCC GAGCAATGAC AGCAGCGGCA AGCTGGGCGG CTATGGCGTG
GTGAATCTGT CGGCGCGCTA CAACATCACG AAAGCATGGT ACGTGGCCGC GCAAATCCAG
AATCTGTTGG ACAAGGACTA TGAAACGGCC TACTCGTATA ACTCGCCGCG GCGCGGTGCG
TATCTCACGG TTGGTTGGCA GCAGCAGTGA
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| Protein sequence | MLSPIARAAL LAFASLPIVV HAQAASSSAS SSAQDSSAAE PSAAVLSPVV VTADRAPQAL
VDTIPQTSLF DQQDIADTTA TDLPGLLQLA PGAQISRTGG PGSTASLSLR GASSTQSLLL
IDGVRVDSVS LGAPQLAQIP LDQIDHVEVV NGNVSALYGS GAIGGVVQVF TKDGGDHPPR
FNFSLGYGSY HTQTQQAGVN GALDKDGKTT FSISLARSKD DGFSSLNTKE APNANPNANG
YLNESISASL RHKFNDRWDA GVSYFQSNGN NSYDNAYGVP TDLNNLYSKV RQVSAFANGK
LADWWTTHFI VAEGDDRSVS NTNGVYNGRF DTDNRQYTWQ NDFALAAQQK LQVGYEHLDQ
SLDSDTFAAP DRHVDSGFAG YTGRFGRNQI QANVRRDQYS DFGGANSYYL GYGFDITGHW
KVSASYSDSF RAPSFDDLYY PFSGNPSIQP ERSHSIEAAL QYASNALGVM RLTAFQTRYS
NLINYEQVTP GIYLAENVGH AKVQGLEGSW SGHVGKTDVR ASVTLQNPVD LDNDADLVRR
ARRFGALTVN RSIAGWRVGG EWIVSGPSND SSGKLGGYGV VNLSARYNIT KAWYVAAQIQ
NLLDKDYETA YSYNSPRRGA YLTVGWQQQ
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